RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MRPS36P82909 103 aaKnown RBP1.83□□□□□ -2.12
SF3B1-210ENST00000482158 KHDC3LQ587J8 217 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 OR2T2Q6IF00 324 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 UNQ5815/PRO19632Q6UWF5 114 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 ZNF720Q7Z2F6 126 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 DYNAPQ8N1N2 210 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 C10orf105Q8TEF2 133 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 CLEC2BQ92478 149 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 AQP3Q92482 292 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 IMMP2LQ96T52 175 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 DSCR8Q96T75 97 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 REG4Q9BYZ8 158 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 BET1LQ9NYM9 111 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 TAS2R4Q9NYW5 299 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 ABCC5O15440 1437 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 CASKIN1Q8WXD9 1431 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 SCAPERQ9BY12 1400 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 UACAQ9BZF9 1416 aa1.83□□□□□ -2.12
SF3B1-210ENST00000482158 MUC4Q99102 2169 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 INO80Q9ULG1 1556 aaPredicted RBP1.82□□□□□ -2.12
SF3B1-210ENST00000482158 IGHV3-64A0A075B6Q5 118 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 RBAKDNA6NC62 111 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 H3BQ15 152 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 NDUFB6O95139 128 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 SHBGP04278 402 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 SAA1P0DJI8 122 aaPredicted RBP1.82□□□□□ -2.12
SF3B1-210ENST00000482158 COX7CP15954 63 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 RPL28P46779 137 aaKnown RBP1.82□□□□□ -2.12
SF3B1-210ENST00000482158 NPC2P61916 151 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 CIRBPQ14011 172 aaKnown RBP1.82□□□□□ -2.12
SF3B1-210ENST00000482158 IQCJQ1A5X6 159 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 Q5BKY6 102 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 ATP6V0E2Q8NHE4 81 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 ZNF563Q8TA94 476 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 PSMF1Q92530 271 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 CHCHD1Q96BP2 118 aaKnown RBP1.82□□□□□ -2.12
SF3B1-210ENST00000482158 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 NABP2Q9BQ15 211 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 KIAA1549LQ6ZVL6 1849 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 RIC1Q4ADV7 1423 aa1.82□□□□□ -2.12
SF3B1-210ENST00000482158 EXPH5Q8NEV8 1989 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 TMEM131LA2VDJ0 1609 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 IQGAP3Q86VI3 1631 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 UBR1Q8IWV7 1749 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 MUC22E2RYF6 1773 aaPredicted RBP1.81□□□□□ -2.12
SF3B1-210ENST00000482158 SCN11AQ9UI33 1791 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 FAM24AA6NFZ4 105 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 ZNF736B4DX44 427 aaPredicted RBP1.81□□□□□ -2.12
SF3B1-210ENST00000482158 K7EP34 96 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 CREBL2O60519 120 aaPredicted RBP1.81□□□□□ -2.12
SF3B1-210ENST00000482158 IGLV1-51P01701 117 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 CLPSP04118 112 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 NMBP08949 121 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 ZNF705BP0CI00 300 aaPredicted RBP1.81□□□□□ -2.12
SF3B1-210ENST00000482158 PEA15Q15121 130 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 ASB16-AS1Q495Z4 193 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 Q8IYB0 196 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 C10orf82Q8WW14 230 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 POP5Q969H6 163 aaKnown RBP1.81□□□□□ -2.12
SF3B1-210ENST00000482158 HYLS1Q96M11 299 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 TPRKBQ9Y3C4 175 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 ZFHX2Q9C0A1 2572 aaPredicted RBP1.81□□□□□ -2.12
SF3B1-210ENST00000482158 ARHGEF12Q9NZN5 1544 aa1.81□□□□□ -2.12
SF3B1-210ENST00000482158 MROH1Q8NDA8 1641 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 NWD2Q9ULI1 1742 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 LAMB1P07942 1786 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 TRAV1-1A0A0B4J248 108 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 B4DSR2 109 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 SNCGO76070 127 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 COX6A1P12074 109 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 DEFA4P12838 97 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 NFYAP23511 347 aaPredicted RBP1.8□□□□□ -2.12
SF3B1-210ENST00000482158 CKS2P33552 79 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 TDRG1Q3Y452 100 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 ALKAL2Q6UX46 152 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 ATP11AUNQ6ZP68 121 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 COA5Q86WW8 74 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 SBSPONQ8IVN8 264 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 Q8N814 137 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 Q8N8P6 123 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 OR2T35Q8NGX2 323 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 VSTM2AQ8TAG5 236 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 LINC00467Q9BRT7 94 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 DPH3P1Q9H4G8 78 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 PXDNQ92626 1479 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 MAGI3Q5TCQ9 1506 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 ABCA10Q8WWZ4 1543 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 PEAK1Q9H792 1746 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 TNS1Q9HBL0 1735 aaKnown RBP1.8□□□□□ -2.12
SF3B1-210ENST00000482158 MYO5CQ9NQX4 1742 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 PLXNA1Q9UIW2 1896 aa1.8□□□□□ -2.12
SF3B1-210ENST00000482158 TRAV7A0A075B6U4 112 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 IGKV2D-26A0A0A0MRZ7 120 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 J3QLW9 94 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 LYRM1O43325 122 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 SSSCA1O60232 199 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 PROSCO94903 275 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 APOC3P02656 99 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 SLC25A6P12236 298 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 INSL4Q14641 139 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms