RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 EPPK1P58107 5090 aaKnown RBP8.72□□□□□ -1.01
PTPRF-213ENST00000481019 TRBV24-1A0A075B6N3 115 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 SMIM27A0A1W2PRY6 76 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 C7orf71A4D174 169 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 S100A8P05109 93 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 CRIP1P50238 77 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 FOXA3P55318 350 aaPredicted RBP8.71□□□□□ -1.02
PTPRF-213ENST00000481019 RRN3P1Q2M238 152 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 LINC01559Q495D7 138 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 FAM159AQ6UWV7 190 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 LINC01587Q99440 93 aa8.71□□□□□ -1.02
PTPRF-213ENST00000481019 TRAV12-3A0A0B4J271 114 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 A0A1B0GW15 77 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 F2Z2F3 143 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 SCO1O75880 301 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 HTN1P15515 57 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 ELOBQ15370 118 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 CBLN2Q8IUK8 224 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 URGCP-MRPS24S4R325 110 aa8.7□□□□□ -1.02
PTPRF-213ENST00000481019 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
PTPRF-213ENST00000481019 ATP5L2Q7Z4Y8 100 aa8.69□□□□□ -1.02
PTPRF-213ENST00000481019 TMEM256Q8N2U0 113 aa8.69□□□□□ -1.02
PTPRF-213ENST00000481019 FAM210BQ96KR6 192 aa8.69□□□□□ -1.02
PTPRF-213ENST00000481019 HIGD1CA8MV81 97 aa8.68□□□□□ -1.02
PTPRF-213ENST00000481019 SPART-AS1P0CW21 52 aa8.68□□□□□ -1.02
PTPRF-213ENST00000481019 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
PTPRF-213ENST00000481019 ZNF80P51504 273 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-213ENST00000481019 RIGQ13278 110 aa8.68□□□□□ -1.02
PTPRF-213ENST00000481019 TDRG1Q3Y452 100 aa8.68□□□□□ -1.02
PTPRF-213ENST00000481019 WDR73Q6P4I2 378 aa8.68□□□□□ -1.02
PTPRF-213ENST00000481019 RNASE8Q8TDE3 154 aaKnown RBP8.68□□□□□ -1.02
PTPRF-213ENST00000481019 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
PTPRF-213ENST00000481019 KLK5Q9Y337 293 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-213ENST00000481019 TRGV11A0A075B6L2 103 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 TRAV10A0A0B4J240 114 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 COLCA2A8K830 154 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 IGLL5B9A064 214 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 ASIPP42127 132 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 FAM3BP58499 235 aaPredicted RBP8.67□□□□□ -1.02
PTPRF-213ENST00000481019 DNLZQ5SXM8 178 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 APLNQ9ULZ1 77 aa8.67□□□□□ -1.02
PTPRF-213ENST00000481019 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 IGHV1OR15-1A0A075B7D0 117 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 A0A1B0GUT8 65 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 MT-ND6P03923 174 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 TYMSP04818 313 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 CACNG7P62955 275 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 SMIM15Q7Z3B0 74 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 NUP35Q8NFH5 326 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 NAGKQ9UJ70 344 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 TP53TG3Q9ULZ0 132 aa8.66□□□□□ -1.02
PTPRF-213ENST00000481019 FRAS1Q86XX4 4008 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 DEFB130BP0DP73 79 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 DEFB130AP0DP74 79 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 RAB5AP20339 215 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 YPEL4Q96NS1 127 aa8.65□□□□□ -1.02
PTPRF-213ENST00000481019 NOP10Q9NPE3 64 aaKnown RBP8.65□□□□□ -1.02
PTPRF-213ENST00000481019 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 LY6G6CO95867 125 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 HTN3P15516 51 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
PTPRF-213ENST00000481019 TCL1AP56279 114 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 DAD1P61803 113 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 HBBP68871 147 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
PTPRF-213ENST00000481019 C11orf72Q8NBR9 251 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 TMEM263Q8WUH6 116 aaKnown RBP8.64□□□□□ -1.03
PTPRF-213ENST00000481019 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 PGLYRP4Q96LB8 373 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 TPPP3Q9BW30 176 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
PTPRF-213ENST00000481019 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 CBY3A6NI87 242 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 LYRM9A8MSI8 78 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 HLA-DQA1P01909 254 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 IGLC6P0CF74 106 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 CTRLP40313 264 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
PTPRF-213ENST00000481019 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 GSN-AS1Q9NRJ2 163 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 PHLDA3Q9Y5J5 127 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 FAT2Q9NYQ8 4349 aa8.63□□□□□ -1.03
PTPRF-213ENST00000481019 GRIFINA4D1Z8 144 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 SNAI2O43623 268 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 GZMBP10144 247 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 MUC21Q5SSG8 566 aa8.62□□□□□ -1.03
PTPRF-213ENST00000481019 SPANXN1Q5VSR9 72 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms