RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PDCD11Q14690 1871 aaKnown RBP5.06□□□□□ -1.6
LSM5-210ENST00000480956 THADAQ6YHU6 1953 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 GREB1Q4ZG55 1949 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 A0A1B0GU33 70 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 OR51F1A6NGY5 319 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 CLPSP04118 112 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 ZNF14P17017 642 aaPredicted RBP5.06□□□□□ -1.6
LSM5-210ENST00000480956 ETV6P41212 452 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 UBA52P62987 128 aaKnown RBP5.06□□□□□ -1.6
LSM5-210ENST00000480956 ZNF846Q147U1 533 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 SLC35E3Q7Z769 313 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 Q8IYB0 196 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 Q6ZQT0 140 aa5.05□□□□□ -1.6
LSM5-210ENST00000480956 Q6ZR54 194 aa5.05□□□□□ -1.6
LSM5-210ENST00000480956 LYPD6Q86Y78 171 aa5.05□□□□□ -1.6
LSM5-210ENST00000480956 CEP290O15078 2479 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 TCRBV3S1A0A5B6 114 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 C17orf112F2Z3M2 114 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 GNGT1P63211 74 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 ASB16-AS1Q495Z4 193 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 HYLS1Q96M11 299 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 OR8B2Q96RD0 313 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 HHLA3Q9XRX5 114 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 S4R3C0 116 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 MICAL3Q7RTP6 2002 aa5.04□□□□□ -1.6
LSM5-210ENST00000480956 A0A1W2PRS3 328 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 PSMF1Q92530 271 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 IGHV3OR16-8A0A075B7F1 116 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 TRAV3A0A0B4J244 114 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 IGHV1-18A0A0C4DH31 117 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 OOSP1A8MZH6 123 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 LPAL2Q16609 132 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 Q6AWC8 147 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 LSM10Q969L4 123 aaKnown RBP5.03□□□□□ -1.6
LSM5-210ENST00000480956 DPY30Q9C005 99 aa5.03□□□□□ -1.6
LSM5-210ENST00000480956 TNRC18O15417 2968 aaPredicted RBP5.02□□□□□ -1.61
LSM5-210ENST00000480956 LTBP2Q14767 1821 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 hDV103S1A0JD37 113 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 HCRTO43612 131 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 NNATQ16517 81 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 Q8N814 137 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 AQP10Q96PS8 301 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 CST11Q9H112 138 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 EYSQ5T1H1 3165 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 GBF1Q92538 1859 aa5.02□□□□□ -1.61
LSM5-210ENST00000480956 SZT2Q5T011 3432 aa5.01□□□□□ -1.61
LSM5-210ENST00000480956 TMEM262E9PQX1 116 aa5.01□□□□□ -1.61
LSM5-210ENST00000480956 M0R233 179 aa5.01□□□□□ -1.61
LSM5-210ENST00000480956 TSC2P49815 1807 aa5.01□□□□□ -1.61
LSM5-210ENST00000480956 PTPRBP23467 1997 aa5.01□□□□□ -1.61
LSM5-210ENST00000480956 IGKV2D-26A0A0A0MRZ7 120 aa5□□□□□ -1.61
LSM5-210ENST00000480956 IGHV1-24A0A0C4DH33 117 aa5□□□□□ -1.61
LSM5-210ENST00000480956 A6NN06 94 aa5□□□□□ -1.61
LSM5-210ENST00000480956 IGLV1-51P01701 117 aa5□□□□□ -1.61
LSM5-210ENST00000480956 ROMO1P60602 79 aa5□□□□□ -1.61
LSM5-210ENST00000480956 DEFB103AP81534 67 aa5□□□□□ -1.61
LSM5-210ENST00000480956 CHD7Q9P2D1 2997 aa5□□□□□ -1.61
LSM5-210ENST00000480956 MGST1P10620 155 aaKnown RBP5□□□□□ -1.61
LSM5-210ENST00000480956 SNRPFP62306 86 aaKnown RBP5□□□□□ -1.61
LSM5-210ENST00000480956 NDPQ00604 133 aa5□□□□□ -1.61
LSM5-210ENST00000480956 PYY3Q5JQD4 70 aa5□□□□□ -1.61
LSM5-210ENST00000480956 Q6ZS92 163 aa5□□□□□ -1.61
LSM5-210ENST00000480956 ATP6V0E2Q8NHE4 81 aa5□□□□□ -1.61
LSM5-210ENST00000480956 REV3LO60673 3130 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 ZNF705FA8MVS1 300 aaPredicted RBP4.99□□□□□ -1.61
LSM5-210ENST00000480956 MRGPRG-AS1Q2M3A8 158 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 OR2T2Q6IF00 324 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 OR2T35Q8NGX2 323 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 AP4S1Q9Y587 144 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 KIF25-AS1Q9Y6Z4 181 aa4.99□□□□□ -1.61
LSM5-210ENST00000480956 COL4A6Q14031 1691 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 XIRP2A4UGR9 3374 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 CROCCQ5TZA2 2017 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 C5orf42Q9H799 3197 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 RPL36A-HNRNPH2H7BZ11 118 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 CRPP02741 224 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 LINC00032P0C843 101 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 NPC2P61916 151 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 SLC50A1Q9BRV3 221 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 PRO1933Q9H354 126 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 PLXNA4Q9HCM2 1894 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 CHD9Q3L8U1 2897 aa4.98□□□□□ -1.61
LSM5-210ENST00000480956 B4DSR2 109 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 EDF1O60869 148 aaKnown RBP4.97□□□□□ -1.61
LSM5-210ENST00000480956 EIF4EBP1Q13541 118 aaPredicted RBP4.97□□□□□ -1.61
LSM5-210ENST00000480956 KPRPQ5T749 579 aaPredicted RBP4.97□□□□□ -1.61
LSM5-210ENST00000480956 Q96M85 177 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 TCF20Q9UGU0 1960 aaKnown RBP4.97□□□□□ -1.61
LSM5-210ENST00000480956 MYO16Q9Y6X6 1858 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 IGKV1D-42A0A075B6H8 117 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 IGHV3-64A0A075B6Q5 118 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 FAM24AA6NFZ4 105 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 J3QLW9 94 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 GYPBP06028 91 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 C1orf134Q5TEV5 83 aa4.97□□□□□ -1.61
LSM5-210ENST00000480956 VAMP8Q9BV40 100 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms