RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 NDUFB1O75438 58 aa7.59□□□□□ -1.2
VEGFA-212ENST00000480614 COA6Q5JTJ3 125 aaKnown RBP7.59□□□□□ -1.2
VEGFA-212ENST00000480614 VPREB3Q9UKI3 123 aa7.59□□□□□ -1.2
VEGFA-212ENST00000480614 H0YGX0 51 aa7.59□□□□□ -1.2
VEGFA-212ENST00000480614 WIPF2Q8TF74 440 aaPredicted RBP7.58□□□□□ -1.2
VEGFA-212ENST00000480614 C11orf52Q96A22 123 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 VOPP1Q96AW1 172 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 FOXE3Q13461 319 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 G3V318 75 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 PRRC2CQ9Y520 2896 aaKnown RBP7.58□□□□□ -1.2
VEGFA-212ENST00000480614 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.58□□□□□ -1.2
VEGFA-212ENST00000480614 Q6ZWC4 215 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 ZNF503Q96F45 646 aa7.58□□□□□ -1.2
VEGFA-212ENST00000480614 NXPH4O95158 308 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 DEFB104AQ8WTQ1 72 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 V9GYV3 84 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 C17orf58Q2M2W7 97 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 CR1LQ2VPA4 569 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 ANXA2RQ3ZCQ2 193 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 FXYD5Q96DB9 178 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 F6UB75 175 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 MRPL35Q9NZE8 188 aaKnown RBP7.57□□□□□ -1.2
VEGFA-212ENST00000480614 LY6HO94772 140 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 IGFBPL1Q8WX77 278 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 TIRAPP58753 221 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 ETDBQ3ZM63 59 aa7.57□□□□□ -1.2
VEGFA-212ENST00000480614 IGKV2D-24A0A075B6R9 120 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 TRAV12-1A0A0B4J245 112 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 LTAP01374 205 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 XCL1P47992 114 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 C9orf66Q5T8R8 295 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 LOXP28300 417 aaPredicted RBP7.56□□□□□ -1.2
VEGFA-212ENST00000480614 NOP10Q9NPE3 64 aaKnown RBP7.56□□□□□ -1.2
VEGFA-212ENST00000480614 IGKV1-6A0A0C4DH72 117 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 IGLV1-44P01699 117 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 ICOSQ9Y6W8 199 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 NDUFC2O95298 119 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 IGLC1P0CG04 106 aa7.56□□□□□ -1.2
VEGFA-212ENST00000480614 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
VEGFA-212ENST00000480614 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 MRPL23Q16540 153 aaKnown RBP7.55□□□□□ -1.2
VEGFA-212ENST00000480614 NDUFS7O75251 213 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 IGHG2P01859 326 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 OPRPNQ99935 248 aaPredicted RBP7.55□□□□□ -1.2
VEGFA-212ENST00000480614 J3KT08 172 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 BUB3O43684 328 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 TM2D2Q9BX73 214 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 J3QKU1 62 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 SPATA25Q9BR10 227 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 C15orf65H3BRN8 121 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 PDE6GP18545 87 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
VEGFA-212ENST00000480614 EPG5Q9HCE0 2579 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 IGKV1OR2-108A0A075B7D4 117 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 Q9H8V8 135 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 LYPD6BQ8NI32 183 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 CRYGCP07315 174 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 A0A0G2JRQ6 117 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 SPART-AS1P0CW21 52 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 CCL18P55774 89 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 ATOX1O00244 68 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 CFC1P0CG37 223 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 C9JQL5 133 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 CXCL5P42830 114 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 COX7A2LO14548 114 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 PRR31Q5SQ13 230 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 LTBP2Q14767 1821 aa7.54□□□□□ -1.2
VEGFA-212ENST00000480614 NPYP01303 97 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 U3KQE9 123 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 CCL24O00175 119 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 IGLV3-9A0A075B6K5 115 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 IGKV1-39P01597 117 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 IGKV1D-39P04432 117 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 MLANAQ16655 118 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 CYYR1Q96J86 154 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 A0A1B0GX51 115 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 HOXB4P17483 251 aaPredicted RBP7.53□□□□□ -1.2
VEGFA-212ENST00000480614 DEFB125Q8N687 156 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 VSIG2Q96IQ7 327 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 RPL18AQ02543 176 aaKnown RBP7.53□□□□□ -1.2
VEGFA-212ENST00000480614 CAMK2N2Q96S95 79 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 TINCRA0A1B0GVN0 87 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 IGLC7A0M8Q6 106 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 C14orf177Q52M58 125 aa7.53□□□□□ -1.2
VEGFA-212ENST00000480614 C12orf74Q32Q52 190 aa7.52□□□□□ -1.2
VEGFA-212ENST00000480614 GYPEP15421 78 aa7.52□□□□□ -1.21
VEGFA-212ENST00000480614 IGLL5B9A064 214 aa7.52□□□□□ -1.21
VEGFA-212ENST00000480614 K7ERJ3 54 aa7.52□□□□□ -1.21
VEGFA-212ENST00000480614 C15orf53Q8NAA6 179 aa7.52□□□□□ -1.21
VEGFA-212ENST00000480614 K7EQD1 137 aa7.51□□□□□ -1.21
VEGFA-212ENST00000480614 CRYBA4P53673 196 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms