RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 LRP6O75581 1613 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 DCHS2Q6V1P9 2916 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 TRPM7Q96QT4 1865 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 KIF21AQ7Z4S6 1674 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 PREX1Q8TCU6 1659 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 CSMD2Q7Z408 3487 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 MYCBP2O75592 4640 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 PHLPP1O60346 1717 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 LOC107984156A0A0G2JMH3 177 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 SPINK6Q6UWN8 80 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 ARL17AQ8IVW1 177 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.31□□□□□ -2.36
CCDC58-204ENST00000479414 OR5AK2Q8NH90 309 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 GRPEL2Q8TAA5 225 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 PRELID3AQ96N28 172 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 CUX1P39880 1505 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 MTORP42345 2549 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 NWD1Q149M9 1564 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 KIAA1549LQ6ZVL6 1849 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 ADGRG4Q8IZF6 3080 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 KIAA0556O60303 1618 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 PRKDCP78527 4128 aaKnown RBP0.31□□□□□ -2.36
CCDC58-204ENST00000479414 USP54Q70EL1 1684 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 HIVEP1P15822 2718 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 RIF1Q5UIP0 2472 aaKnown RBP0.3□□□□□ -2.36
CCDC58-204ENST00000479414 BCORL1Q5H9F3 1711 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 RBBP6Q7Z6E9 1792 aaKnown RBP0.3□□□□□ -2.36
CCDC58-204ENST00000479414 KCPQ6ZWJ8 1503 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 A0A1W2PRE2 83 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 A6NN06 94 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 C5orf58C9J3I9 102 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 E5RI56 91 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 BCL2P10415 239 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 SDC2P34741 201 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 ISOC1Q96CN7 298 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 SVEP1Q4LDE5 3571 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 DSPPQ9NZW4 1301 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 MGAM2Q2M2H8 2515 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 TET3O43151 1660 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 SACSQ9NZJ4 4579 aa0.3□□□□□ -2.36
CCDC58-204ENST00000479414 LAMA5O15230 3695 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 ITPR2Q14571 2701 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 ZCCHC6Q5VYS8 1495 aaKnown RBP0.29□□□□□ -2.36
CCDC58-204ENST00000479414 NDUFA6P56556 154 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 LINC00305Q7Z4B0 112 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 DEFB132Q7Z7B7 95 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 LINC00208Q96KT6 92 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 PCBD2Q9H0N5 130 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
CCDC58-204ENST00000479414 DYNC2H1Q8NCM8 4307 aaKnown RBP0.29□□□□□ -2.36
CCDC58-204ENST00000479414 CASZ1Q86V15 1759 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 LAMA1P25391 3075 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 ABCC10Q5T3U5 1492 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 MRC2Q9UBG0 1479 aa0.29□□□□□ -2.36
CCDC58-204ENST00000479414 PKHD1P08F94 4074 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 FAM186AA6NE01 2351 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 DMDP11532 3685 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 DLC1Q96QB1 1528 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 SPTA1P02549 2419 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 RREB1Q92766 1687 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 NUP188Q5SRE5 1749 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 ABCA3Q99758 1704 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 TNS1Q9HBL0 1735 aaKnown RBP0.28□□□□□ -2.36
CCDC58-204ENST00000479414 A0A1W2PRS3 328 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 PRORSD1PA6NEY8 169 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 SULT1C4O75897 302 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 MAXP61244 160 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 AP1S3Q96PC3 154 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 CIB3Q96Q77 187 aaPredicted RBP0.28□□□□□ -2.36
CCDC58-204ENST00000479414 CMYA5Q8N3K9 4069 aa0.28□□□□□ -2.36
CCDC58-204ENST00000479414 ZMYM4Q5VZL5 1548 aa0.28□□□□□ -2.37
CCDC58-204ENST00000479414 LRP1BQ9NZR2 4599 aa0.28□□□□□ -2.37
CCDC58-204ENST00000479414 ZCCHC11Q5TAX3 1644 aaKnown RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 ADCY10Q96PN6 1610 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 COL4A6Q14031 1691 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 HSPG2P98160 4391 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 F8P00451 2351 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 TRRAPQ9Y4A5 3859 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 ALMS1Q8TCU4 4167 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 CHD9Q3L8U1 2897 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 TRBV27A0A0K0K1C4 114 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 TPT1P13693 172 aaKnown RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 CAV3P56539 151 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 SPINK13Q1W4C9 94 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 GLYATL3Q5SZD4 288 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 IZUMO2Q6UXV1 221 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 BLMP54132 1417 aaPredicted RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 FGD6Q6ZV73 1430 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 TCOF1Q13428 1488 aaKnown RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 DIP2AQ14689 1571 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 PREX2Q70Z35 1606 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 RNF17Q9BXT8 1623 aaKnown RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 NRXN3Q9Y4C0 1643 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 LYSTQ99698 3801 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 MAP1AP78559 2803 aaPredicted RBP0.27□□□□□ -2.37
CCDC58-204ENST00000479414 TACC2O95359 2948 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 PAPPA2Q9BXP8 1791 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 DNAH1Q9P2D7 4330 aa0.27□□□□□ -2.37
CCDC58-204ENST00000479414 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms