RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 NDPQ00604 133 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 IGHV3-49A0A0A0MS15 119 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 NDUFA7O95182 113 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 RNF182Q8N6D2 247 aa8.54□□□□□ -1.04
LRRFIP1-211ENST00000478958 TRBV6-1A0A0K0K1D8 114 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 CD3EP07766 207 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 HERVK_113P63121 156 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 FOXC1Q12948 553 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 DPM3Q9P2X0 92 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 IGF2RP11717 2491 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 SLC25A20O43772 301 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 OR11H6Q8NGC7 330 aa8.53□□□□□ -1.04
LRRFIP1-211ENST00000478958 TRAV40A0A0B4J280 105 aa8.52□□□□□ -1.04
LRRFIP1-211ENST00000478958 PRAC2D3DTV9 90 aa8.52□□□□□ -1.04
LRRFIP1-211ENST00000478958 IGLC6P0CF74 106 aa8.52□□□□□ -1.04
LRRFIP1-211ENST00000478958 ODF3Q96PU9 254 aa8.52□□□□□ -1.04
LRRFIP1-211ENST00000478958 PTPRQQ9UMZ3 2332 aa8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 MUC6Q6W4X9 2439 aa8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 A0A1B0GX51 115 aa8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 PAX8Q06710 450 aa8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 ZNF672Q499Z4 452 aaPredicted RBP8.52□□□□□ -1.05
LRRFIP1-211ENST00000478958 LY6LH3BQJ8 138 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 PDE6HQ13956 83 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 U3KQK5 164 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 TRAV26-2A0A0B4J265 109 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 DYNAPQ8N1N2 210 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 Q8NA96 180 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 SMAD5-AS1Q9Y6J3 95 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 ATP5LO75964 103 aa8.51□□□□□ -1.05
LRRFIP1-211ENST00000478958 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 LINC01619G3V211 115 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 TNFRSF6BO95407 300 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 CD7P09564 240 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 IL17RELQ6ZVW7 336 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 Q8N1Y9 231 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 SPRY2O43597 315 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 ECSCRQ19T08 205 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 CFHR4Q92496 578 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 RNF185Q96GF1 192 aa8.5□□□□□ -1.05
LRRFIP1-211ENST00000478958 CTSGP08311 255 aa8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 TRGV3P03979 118 aa8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 ZNF575Q86XF7 245 aa8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 MRAPQ8TCY5 172 aa8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 RNF5Q99942 180 aa8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
LRRFIP1-211ENST00000478958 DTX2Q86UW9 622 aa8.48□□□□□ -1.05
LRRFIP1-211ENST00000478958 TMEM219Q86XT9 240 aa8.48□□□□□ -1.05
LRRFIP1-211ENST00000478958 KLK15Q9H2R5 256 aa8.48□□□□□ -1.05
LRRFIP1-211ENST00000478958 UBE2D1P51668 147 aa8.48□□□□□ -1.05
LRRFIP1-211ENST00000478958 KIR2DL5BQ8NHK3 375 aa8.48□□□□□ -1.05
LRRFIP1-211ENST00000478958 F8WDY8 70 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 M0R2P5 195 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 NDUFA3O95167 84 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 UCNP55089 124 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 RPS28P62857 69 aaKnown RBP8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 ZNF56Q15929 161 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 C15orf32Q32M92 178 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 TIMD4Q96H15 378 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 FAM236AA0A1B0GUQ0 79 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 FAM236BA0A1B0GV22 79 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 EFNA4P52798 201 aa8.47□□□□□ -1.05
LRRFIP1-211ENST00000478958 UQCRQO14949 82 aa8.46□□□□□ -1.05
LRRFIP1-211ENST00000478958 NPBQ8NG41 125 aa8.46□□□□□ -1.05
LRRFIP1-211ENST00000478958 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.05
LRRFIP1-211ENST00000478958 C11orf21Q9P2W6 132 aa8.46□□□□□ -1.05
LRRFIP1-211ENST00000478958 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.06
LRRFIP1-211ENST00000478958 RBAKDNA6NC62 111 aa8.46□□□□□ -1.06
LRRFIP1-211ENST00000478958 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
LRRFIP1-211ENST00000478958 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
LRRFIP1-211ENST00000478958 LGALS1P09382 135 aaKnown RBP8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 CRIP2P52943 208 aaPredicted RBP8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 VMO1Q7Z5L0 202 aa8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 NXT2Q9NPJ8 142 aaKnown RBP8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 VPS13CQ709C8 3753 aa8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 TEX49A0A1B0GTD5 131 aa8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 PMVKQ15126 192 aa8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 CLEC19AQ6UXS0 136 aa8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 NDUFA11Q86Y39 141 aa8.45□□□□□ -1.06
LRRFIP1-211ENST00000478958 G3V318 75 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 IGHV7-81A0A0B4J1V7 117 aa8.44□□□□□ -1.06
LRRFIP1-211ENST00000478958 SPANXN1Q5VSR9 72 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms