RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 HDDC3Q8N4P3 179 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 GLYATL2Q8WU03 294 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 SMIM4Q8WVI0 70 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 DIRC1Q969H9 104 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 DTNBP1Q96EV8 351 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 SMIM12Q96EX1 92 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 C2orf50Q96LR7 162 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 TMEM237Q96Q45 408 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 CMSS1Q9BQ75 279 aaKnown RBP-1.34□□□□□ -2.62
CALD1-218ENST00000478075 RSPH9Q9H1X1 276 aaPredicted RBP-1.34□□□□□ -2.62
CALD1-218ENST00000478075 PRO3102Q9H379 93 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 FAM96AQ9H5X1 160 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 LYRM4Q9HD34 91 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 UQCC1Q9NVA1 299 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 HYPKQ9NX55 129 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 HIGD1BQ9P298 99 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 TPRKBQ9Y3C4 175 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 V9GYY9 64 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 YTHDC2Q9H6S0 1430 aaKnown RBP-1.34□□□□□ -2.62
CALD1-218ENST00000478075 RIMS2Q9UQ26 1411 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 NINLQ9Y2I6 1382 aa-1.34□□□□□ -2.62
CALD1-218ENST00000478075 C4AP0C0L4 1744 aa-1.35□□□□□ -2.62
CALD1-218ENST00000478075 C4BP0C0L5 1744 aa-1.35□□□□□ -2.62
CALD1-218ENST00000478075 PRDM2Q13029 1718 aa-1.35□□□□□ -2.62
CALD1-218ENST00000478075 CEP350Q5VT06 3117 aa-1.35□□□□□ -2.62
CALD1-218ENST00000478075 PSME4Q14997 1843 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CCDC141Q6ZP82 1450 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 A0A087WUJ7 227 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CTXND1A0A1B0GTU2 59 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CLPSL1A2RUU4 121 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 HCG22E2RYF7 251 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CCL22O00626 93 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 LIN7AO14910 233 aaPredicted RBP-1.35□□□□□ -2.63
CALD1-218ENST00000478075 RER1O15258 196 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 GMFGO60234 142 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 MTX2O75431 263 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CST4P01036 141 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 RANBP1P43487 201 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CCSMST1Q4G0I0 132 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 LRRC23Q53EV4 343 aaPredicted RBP-1.35□□□□□ -2.63
CALD1-218ENST00000478075 SPANXN2Q5MJ10 180 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 AKR1C8PQ5T2L2 129 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 SSX9Q7RTT3 188 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 DEFB106AQ8N104 65 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 TMEM86BQ8N661 226 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 COMMD1Q8N668 190 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CCDC148Q8NFR7 591 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 OR51A4Q8NGJ6 313 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 OR5AK3PQ8NH89 298 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 FAM81AQ8TBF8 368 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CCDC12Q8WUD4 166 aaPredicted RBP-1.35□□□□□ -2.63
CALD1-218ENST00000478075 BRK1Q8WUW1 75 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 ATP6V1E2Q96A05 226 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 PRELID3AQ96N28 172 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 MAP1LC3AQ9H492 121 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 CACYBPQ9HB71 228 aaKnown RBP-1.35□□□□□ -2.63
CALD1-218ENST00000478075 POLE3Q9NRF9 147 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 BLOC1S6Q9UL45 172 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 UBE2D4Q9Y2X8 147 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 ASB4Q9Y574 426 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 DISP2A7MBM2 1401 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 MYH7P12883 1935 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 KIF21AQ7Z4S6 1674 aa-1.35□□□□□ -2.63
CALD1-218ENST00000478075 AQRO60306 1485 aaKnown RBP eCLIP-1.36□□□□□ -2.63
CALD1-218ENST00000478075 NCAPD3P42695 1498 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 LRRC37A3O60309 1634 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 CRYBG3Q68DQ2 2970 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 hCG_1818297A0A087WSY0 165 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 TRAV26-2A0A0B4J265 109 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 TRAV12-3A0A0B4J271 114 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 MMP24-AS1A0A0U1RRL7 71 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 DAPL1A0PJW8 107 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 TMEM114B3SHH9 223 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 ATP5HO75947 161 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 CST7O76096 145 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 IFNA21P01568 189 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 TRACP01848 142 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 SERPINA6P08185 405 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 CXCL1P09341 107 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 LIMS3P0CW19 117 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 LIMS4P0CW20 117 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 SMIM10L2AP0DMW4 78 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 SMIM10L2BP0DMW5 78 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 DDTP30046 118 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 PEX19P40855 299 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 GTF2A1P52655 376 aaPredicted RBP-1.36□□□□□ -2.63
CALD1-218ENST00000478075 HADHBP55084 474 aaKnown RBP-1.36□□□□□ -2.63
CALD1-218ENST00000478075 CCL18P55774 89 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 ARPP19P56211 112 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 NDUFA6P56556 154 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 RPS20P60866 119 aaKnown RBP-1.36□□□□□ -2.63
CALD1-218ENST00000478075 COX17Q14061 63 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 SPCS2Q15005 226 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 C6orf183Q5T699 404 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 BCL2L15Q5TBC7 163 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 CST9Q5W186 159 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 TMEM53Q6P2H8 277 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 FAM223AQ8IWN6 122 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 FAM216BQ8N7L0 139 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 OR6N2Q8NGY6 317 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms