RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 Q6ZRU5 148 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 GOLT1AQ6ZVE7 132 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 NIT1Q86X76 327 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 PTH2Q96A98 100 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 PGPA6NDG6 321 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 SEC11BP0C7V7 166 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 CMTM2Q8TAZ6 248 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 SEC22CQ9BRL7 303 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 NMES1Q9C002 83 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 KCNIP2Q9NS61 270 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
APOBEC3F-203ENST00000476513 TNXBP22105 4242 aa10.6□□□□□ -0.71
APOBEC3F-203ENST00000476513 C14orf177Q52M58 125 aa10.6□□□□□ -0.71
APOBEC3F-203ENST00000476513 ATRAIDQ6UW56 229 aa10.6□□□□□ -0.71
APOBEC3F-203ENST00000476513 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
APOBEC3F-203ENST00000476513 PARLQ9H300 379 aa10.6□□□□□ -0.71
APOBEC3F-203ENST00000476513 ZFP2Q6ZN57 461 aa10.59□□□□□ -0.71
APOBEC3F-203ENST00000476513 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
APOBEC3F-203ENST00000476513 WDR61Q9GZS3 305 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-203ENST00000476513 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
APOBEC3F-203ENST00000476513 IL7P13232 177 aa10.58□□□□□ -0.72
APOBEC3F-203ENST00000476513 ASIPP42127 132 aa10.58□□□□□ -0.72
APOBEC3F-203ENST00000476513 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3F-203ENST00000476513 KHDC3LQ587J8 217 aa10.58□□□□□ -0.72
APOBEC3F-203ENST00000476513 TMEM75Q8N9X5 138 aa10.58□□□□□ -0.72
APOBEC3F-203ENST00000476513 EIF3GO75821 320 aaKnown RBP eCLIP10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 GNG5P63218 68 aa10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 C14orf178Q8N769 122 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 LINC00479Q96M42 142 aa10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 MBD2Q9UBB5 411 aa10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3F-203ENST00000476513 C17orf112F2Z3M2 114 aa10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 PANO1I0J062 215 aa10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 TAAR5O14804 337 aa10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 FGF8P55075 233 aaPredicted RBP10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 TAS2R45P59539 299 aa10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 OR10G9Q8NGN4 311 aa10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 SGK494Q96LW2 274 aa10.56□□□□□ -0.72
APOBEC3F-203ENST00000476513 TRAV6A0A075B6T7 132 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 A0A087WX48 190 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 A8MWV9 139 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 TCRBP04435 133 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 Q0VG73 95 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 ELOBQ15370 118 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 NDFIP1Q9BT67 221 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
APOBEC3F-203ENST00000476513 PLA2G10O15496 165 aa10.54□□□□□ -0.72
APOBEC3F-203ENST00000476513 LGALSLQ3ZCW2 172 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3F-203ENST00000476513 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
APOBEC3F-203ENST00000476513 JPT2Q9H910 190 aa10.54□□□□□ -0.72
APOBEC3F-203ENST00000476513 USP17L23D6RBM5 183 aa10.53□□□□□ -0.72
APOBEC3F-203ENST00000476513 GCGP01275 180 aa10.53□□□□□ -0.72
APOBEC3F-203ENST00000476513 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
APOBEC3F-203ENST00000476513 C9orf163Q8N9P6 203 aa10.53□□□□□ -0.72
APOBEC3F-203ENST00000476513 NUDT15Q9NV35 164 aa10.53□□□□□ -0.72
APOBEC3F-203ENST00000476513 A0A0D9SG52 128 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 LYRM1O43325 122 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 PRSS1P07477 247 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 ENHOQ6UWT2 76 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 OR5AC2Q9NZP5 309 aa10.52□□□□□ -0.73
APOBEC3F-203ENST00000476513 MZT2BQ6NZ67 158 aa10.51□□□□□ -0.73
APOBEC3F-203ENST00000476513 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
APOBEC3F-203ENST00000476513 SDIM1Q6ZPB5 146 aa10.51□□□□□ -0.73
APOBEC3F-203ENST00000476513 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
APOBEC3F-203ENST00000476513 PQLC2Q6ZP29 291 aa10.5□□□□□ -0.73
APOBEC3F-203ENST00000476513 OR10G7Q8NGN6 311 aa10.5□□□□□ -0.73
APOBEC3F-203ENST00000476513 OR2G3Q8NGZ4 309 aa10.5□□□□□ -0.73
APOBEC3F-203ENST00000476513 PSG8Q9UQ74 426 aa10.5□□□□□ -0.73
APOBEC3F-203ENST00000476513 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 SERTM2A0A1B0GWG4 89 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 H0YIZ8 118 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 HLA-DQA1P01909 254 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 TCRAP04437 139 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 ODF1Q14990 250 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 SMUG1Q53HV7 270 aa10.49□□□□□ -0.73
APOBEC3F-203ENST00000476513 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
APOBEC3F-203ENST00000476513 CRPP02741 224 aa10.48□□□□□ -0.73
APOBEC3F-203ENST00000476513 H2AFB2P0C5Z0 115 aa10.48□□□□□ -0.73
APOBEC3F-203ENST00000476513 LRRC37A5PQ49AS3 106 aa10.48□□□□□ -0.73
APOBEC3F-203ENST00000476513 C15orf54Q8N8G6 183 aa10.48□□□□□ -0.73
APOBEC3F-203ENST00000476513 ENKURQ8TC29 256 aa10.48□□□□□ -0.73
APOBEC3F-203ENST00000476513 RHODO00212 210 aa10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 SIX6O95475 246 aa10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 CIRBPQ14011 172 aaKnown RBP10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 ZFP69Q49AA0 526 aa10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 AKAP14Q86UN6 197 aa10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 C5orf17Q8NAS9 161 aa10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 HSD17B11Q8NBQ5 300 aa10.47□□□□□ -0.73
APOBEC3F-203ENST00000476513 A0A1W2PPV4 95 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms