RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
HLA-F-224ENST00000475996 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
HLA-F-224ENST00000475996 GTSF1Q8WW33 167 aa9.17□□□□□ -0.94
HLA-F-224ENST00000475996 IL36BQ9NZH7 164 aa9.17□□□□□ -0.94
HLA-F-224ENST00000475996 CELA1Q9UNI1 258 aa9.17□□□□□ -0.94
HLA-F-224ENST00000475996 LYZL1Q6UWQ5 148 aa9.16□□□□□ -0.94
HLA-F-224ENST00000475996 PGLYRP4Q96LB8 373 aa9.16□□□□□ -0.94
HLA-F-224ENST00000475996 MRPL16Q9NX20 251 aaKnown RBP9.16□□□□□ -0.94
HLA-F-224ENST00000475996 PHLDA3Q9Y5J5 127 aa9.16□□□□□ -0.94
HLA-F-224ENST00000475996 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 HIGD1CA8MV81 97 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 SNAI2O43623 268 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 OR10AG1Q8NH19 301 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 SPXQ9BT56 116 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 CTDSP1Q9GZU7 261 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
HLA-F-224ENST00000475996 SCRT2Q9NQ03 307 aa9.15□□□□□ -0.94
HLA-F-224ENST00000475996 A0A1W2PPQ1 181 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 M0R2P5 195 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 M0R381 172 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 OR5AL1P0C617 328 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 DAZ2Q13117 558 aaKnown RBP9.15□□□□□ -0.95
HLA-F-224ENST00000475996 Q6ZTI0 123 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 GFRA4Q9GZZ7 299 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 DKK2Q9UBU2 259 aa9.15□□□□□ -0.95
HLA-F-224ENST00000475996 A0A087WWC5 75 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 GAGE12BA1L429 117 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 SPINK4O60575 86 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 GAGE7O76087 117 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 GAGE12FP0CL80 117 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 GAGE12GP0CL81 117 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 GAGE12IP0CL82 117 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 CTRLP40313 264 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 FAM3BP58499 235 aaPredicted RBP9.14□□□□□ -0.95
HLA-F-224ENST00000475996 SPANXN1Q5VSR9 72 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 NUP35Q8NFH5 326 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 SSBP4Q9BWG4 385 aaPredicted RBP9.14□□□□□ -0.95
HLA-F-224ENST00000475996 DNAH7Q8WXX0 4024 aa9.14□□□□□ -0.95
HLA-F-224ENST00000475996 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
HLA-F-224ENST00000475996 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
HLA-F-224ENST00000475996 ZNF876PQ49A33 203 aa9.13□□□□□ -0.95
HLA-F-224ENST00000475996 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
HLA-F-224ENST00000475996 NAT8BQ9UHF3 227 aa9.13□□□□□ -0.95
HLA-F-224ENST00000475996 U3KQK5 164 aa9.13□□□□□ -0.95
HLA-F-224ENST00000475996 FAM231BA6NCW3 169 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 F2Z2F3 143 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 S100A1P23297 94 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
HLA-F-224ENST00000475996 ZFP82Q8N141 532 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 JPT2Q9H910 190 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 URGCP-MRPS24S4R325 110 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 NACAE9PAV3 2078 aa9.12□□□□□ -0.95
HLA-F-224ENST00000475996 NTF3P20783 257 aa9.11□□□□□ -0.95
HLA-F-224ENST00000475996 DAD1P61803 113 aa9.11□□□□□ -0.95
HLA-F-224ENST00000475996 BORCS7Q96B45 105 aa9.11□□□□□ -0.95
HLA-F-224ENST00000475996 TMEM242Q9NWH2 141 aa9.11□□□□□ -0.95
HLA-F-224ENST00000475996 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
HLA-F-224ENST00000475996 TRGV2A0A075B6R0 118 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 CACNG7P62955 275 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 TWIST1Q15672 202 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 LGALS9BQ3B8N2 356 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 MRPL54Q6P161 138 aaKnown RBP9.1□□□□□ -0.95
HLA-F-224ENST00000475996 RASL10AQ92737 203 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 SCO1O75880 301 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 NXPH4O95158 308 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 S100PP25815 95 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 NANOS2P60321 138 aaKnown RBP9.1□□□□□ -0.95
HLA-F-224ENST00000475996 TMEM88Q6PEY1 159 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 KCNIP4Q6PIL6 250 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 CBLN2Q8IUK8 224 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 PTH2Q96A98 100 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 IMMP2LQ96T52 175 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
HLA-F-224ENST00000475996 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
HLA-F-224ENST00000475996 TEX48A0A1B0GUV7 120 aa9.09□□□□□ -0.95
HLA-F-224ENST00000475996 RIGQ13278 110 aa9.09□□□□□ -0.95
HLA-F-224ENST00000475996 C12orf74Q32Q52 190 aa9.09□□□□□ -0.95
HLA-F-224ENST00000475996 WDR73Q6P4I2 378 aa9.09□□□□□ -0.95
HLA-F-224ENST00000475996 LINC00612Q8N6U2 182 aa9.09□□□□□ -0.95
HLA-F-224ENST00000475996 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
HLA-F-224ENST00000475996 TGP01266 2768 aa9.08□□□□□ -0.96
HLA-F-224ENST00000475996 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
HLA-F-224ENST00000475996 A0A087WWL8 130 aa9.08□□□□□ -0.96
HLA-F-224ENST00000475996 IGHV3-73A0A0B4J1V6 119 aa9.08□□□□□ -0.96
HLA-F-224ENST00000475996 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
HLA-F-224ENST00000475996 SAMD10Q9BYL1 202 aa9.08□□□□□ -0.96
HLA-F-224ENST00000475996 EDA2RQ9HAV5 297 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms