RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 Q8NAQ8 132 aa11.28□□□□□ -0.6
CPSF3-203ENST00000475482 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
CPSF3-203ENST00000475482 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
CPSF3-203ENST00000475482 EPPK1P58107 5090 aaKnown RBP11.27□□□□□ -0.61
CPSF3-203ENST00000475482 IGKV3D-20A0A0C4DH25 116 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 A0A1B0GUT8 65 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
CPSF3-203ENST00000475482 MT-ND6P03923 174 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 GZMBP10144 247 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.61
CPSF3-203ENST00000475482 ASIPP42127 132 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
CPSF3-203ENST00000475482 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 MED14OSP0DP75 135 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 HBBP68871 147 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 TDRG1Q3Y452 100 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 TMEM256Q8N2U0 113 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
CPSF3-203ENST00000475482 GNB1LQ9BYB4 327 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 X6R8D5 127 aa11.26□□□□□ -0.61
CPSF3-203ENST00000475482 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 C1orf196B1AJZ1 125 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 SPINK4O60575 86 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 OR5AL1P0C617 328 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 IGLC6P0CF74 106 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 CTRLP40313 264 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 DNLZQ5SXM8 178 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
CPSF3-203ENST00000475482 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
CPSF3-203ENST00000475482 KLK5Q9Y337 293 aaPredicted RBP11.25□□□□□ -0.61
CPSF3-203ENST00000475482 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 GRIFINA4D1Z8 144 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 HLA-DQA1P01909 254 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
CPSF3-203ENST00000475482 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 MIFP14174 115 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 FXYD7P58549 80 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 CACNG7P62955 275 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
CPSF3-203ENST00000475482 MUC21Q5SSG8 566 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
CPSF3-203ENST00000475482 DEFB4AO15263 64 aa11.23□□□□□ -0.61
CPSF3-203ENST00000475482 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
CPSF3-203ENST00000475482 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
CPSF3-203ENST00000475482 RAB4BP61018 213 aa11.23□□□□□ -0.61
CPSF3-203ENST00000475482 RAB5BP61020 215 aa11.23□□□□□ -0.61
CPSF3-203ENST00000475482 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
CPSF3-203ENST00000475482 KMT2AQ03164 3969 aa11.23□□□□□ -0.61
CPSF3-203ENST00000475482 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 SNURFLB1AK76 121 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 SNAI2O43623 268 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 FRZBQ92765 325 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
CPSF3-203ENST00000475482 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 GOLT1BQ9Y3E0 138 aa11.22□□□□□ -0.61
CPSF3-203ENST00000475482 CBY3A6NI87 242 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 ARMS2P0C7Q2 107 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 CAMPP49913 170 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 SPANXN1Q5VSR9 72 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 Q6ZQT7 251 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 LINC01587Q99440 93 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 PHLDA3Q9Y5J5 127 aa11.21□□□□□ -0.61
CPSF3-203ENST00000475482 BIRC6Q9NR09 4857 aa11.21□□□□□ -0.62
CPSF3-203ENST00000475482 H3BVH4 76 aa11.2□□□□□ -0.62
CPSF3-203ENST00000475482 TRGC2P03986 189 aa11.2□□□□□ -0.62
CPSF3-203ENST00000475482 TWIST1Q15672 202 aa11.2□□□□□ -0.62
CPSF3-203ENST00000475482 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
CPSF3-203ENST00000475482 TMEM136Q6ZRR5 245 aa11.2□□□□□ -0.62
CPSF3-203ENST00000475482 VPS13DQ5THJ4 4388 aa11.2□□□□□ -0.62
CPSF3-203ENST00000475482 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
CPSF3-203ENST00000475482 GNRH2O43555 120 aa11.19□□□□□ -0.62
CPSF3-203ENST00000475482 NTF3P20783 257 aa11.19□□□□□ -0.62
CPSF3-203ENST00000475482 FABP9Q0Z7S8 132 aa11.19□□□□□ -0.62
CPSF3-203ENST00000475482 ZNF575Q86XF7 245 aa11.19□□□□□ -0.62
CPSF3-203ENST00000475482 MRPL18Q9H0U6 180 aaKnown RBP11.19□□□□□ -0.62
CPSF3-203ENST00000475482 TMA7Q9Y2S6 64 aaKnown RBP11.19□□□□□ -0.62
CPSF3-203ENST00000475482 LY6G6CO95867 125 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 APCSP02743 223 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 TRGC1P0CF51 173 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 LGALS9CQ6DKI2 356 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 ZFP82Q8N141 532 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
CPSF3-203ENST00000475482 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
CPSF3-203ENST00000475482 IGHV3-16A0A0C4DH30 117 aa11.17□□□□□ -0.62
CPSF3-203ENST00000475482 TCTAP57738 103 aa11.17□□□□□ -0.62
CPSF3-203ENST00000475482 ZNF493Q6ZR52 646 aa11.17□□□□□ -0.62
CPSF3-203ENST00000475482 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
CPSF3-203ENST00000475482 HTN1P15515 57 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms