RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 CCL21O00585 134 aa10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 SCGB2A1O75556 95 aa10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 BAALCQ8WXS3 180 aa10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 CSPG4Q6UVK1 2322 aa10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 SRSF2Q01130 221 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 JPT2Q9H910 190 aa10.43□□□□□ -0.74
SEMA4D-217ENST00000475255 MUC4Q99102 2169 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 CUBNO60494 3623 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 SRD5A1P18405 259 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 CRYBA4P53673 196 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 FHL3Q13643 280 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 METTL26Q96S19 204 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 SLC50A1Q9BRV3 221 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 FOXI1Q12951 378 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 SPATA25Q9BR10 227 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 ANXA2RQ3ZCQ2 193 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 PHLDA3Q9Y5J5 127 aa10.42□□□□□ -0.74
SEMA4D-217ENST00000475255 NCOR2Q9Y618 2525 aa10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 HIVEP3Q5T1R4 2406 aa10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 KIR2DL4Q99706 377 aa10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 TAL2Q16559 108 aa10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 Q6ZS46 218 aa10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 FAM110DQ8TAY7 271 aaPredicted RBP10.41□□□□□ -0.74
SEMA4D-217ENST00000475255 RAX2Q96IS3 184 aa10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 M0R1W7 72 aa10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 TSPAN13O95857 204 aa10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 IGHV3-11P01762 117 aa10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 DLX4Q92988 240 aaPredicted RBP10.4□□□□□ -0.74
SEMA4D-217ENST00000475255 RBAKDNA6NC62 111 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 F5H697 171 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 SAA4P35542 130 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 TOMM6Q96B49 74 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 XGP55808 180 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 CHD8Q9HCK8 2581 aa10.39□□□□□ -0.75
SEMA4D-217ENST00000475255 A0A087WWL8 130 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 GATA3P23771 443 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 CFAP126Q5VTH2 177 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 C9orf47Q6ZRZ4 202 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 BEX4Q9NWD9 120 aaPredicted RBP10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 CRYBG3Q68DQ2 2970 aa10.38□□□□□ -0.75
SEMA4D-217ENST00000475255 TRAV12-1A0A0B4J245 112 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 CRYGDP07320 174 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 SCGB1A1P11684 91 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 TSPEAR-AS2P59090 65 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 MRAP2Q96G30 205 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 EEF1AKMT3Q96AZ1 226 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 DPH3P1Q9H4G8 78 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 A0A1W2PPR1 153 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 EDN2P20800 178 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
SEMA4D-217ENST00000475255 TSHBP01222 138 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 ASIPP42127 132 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 GPHB5Q86YW7 130 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 TCL1BO95988 128 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 EBI3Q14213 229 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 AJUBAQ96IF1 538 aa10.36□□□□□ -0.75
SEMA4D-217ENST00000475255 RNF183Q96D59 192 aa10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 UBTD1Q9HAC8 227 aa10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 ZNF256Q9Y2P7 627 aaPredicted RBP10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 NOTCH3Q9UM47 2321 aa10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 COX6B1P14854 86 aa10.35□□□□□ -0.75
SEMA4D-217ENST00000475255 Q6ZUT4 128 aa10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 CD7P09564 240 aa10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 UBE2D1P51668 147 aa10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 BRD3OSQ6XYD6 125 aa10.34□□□□□ -0.75
SEMA4D-217ENST00000475255 IGLV4-69A0A075B6H9 119 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 TRAV21A0A0B4J279 112 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 A0A0J9YY99 117 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 Q1RN00 199 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 SS18L2Q9UHA2 77 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 FOXC1Q12948 553 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 MINOS1Q5TGZ0 78 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 MINOS1-NBL1R4GNA1 71 aa10.33□□□□□ -0.76
SEMA4D-217ENST00000475255 SPTBN4Q9H254 2564 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms