RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 TEX22C9J3V5 150 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 XCL1P47992 114 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 IL17DQ8TAD2 202 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 PTPN13Q12923 2485 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 CD5LO43866 347 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 KIR3DS1Q14943 382 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 LGALS9BQ3B8N2 356 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 LGALS9CQ6DKI2 356 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 DOCK11Q5JSL3 2073 aa13.91□□□□□ -0.18
NOTCH4-204ENST00000474612 RPL32P62910 135 aaKnown RBP13.9□□□□□ -0.18
NOTCH4-204ENST00000474612 K7EQD1 137 aa13.9□□□□□ -0.18
NOTCH4-204ENST00000474612 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
NOTCH4-204ENST00000474612 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
NOTCH4-204ENST00000474612 SPANXA1Q9NS26 97 aa13.89□□□□□ -0.19
NOTCH4-204ENST00000474612 CSPG4Q6UVK1 2322 aa13.89□□□□□ -0.19
NOTCH4-204ENST00000474612 IGHV4-31P0DP07 118 aa13.89□□□□□ -0.19
NOTCH4-204ENST00000474612 LYPD6Q86Y78 171 aa13.89□□□□□ -0.19
NOTCH4-204ENST00000474612 MRPL35Q9NZE8 188 aaKnown RBP13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 HIST1H4AP62805 103 aaKnown RBP13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 NDUFA11Q86Y39 141 aa13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 WFDC11Q8NEX6 87 aa13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 DAZ2Q13117 558 aaKnown RBP13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 DAZ4Q86SG3 579 aaKnown RBP13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 SCRT2Q9NQ03 307 aa13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 DAZ3Q9NR90 486 aaKnown RBP13.88□□□□□ -0.19
NOTCH4-204ENST00000474612 ODF3L1Q8IXM7 274 aa13.87□□□□□ -0.19
NOTCH4-204ENST00000474612 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
NOTCH4-204ENST00000474612 F8W735 103 aaPredicted RBP13.87□□□□□ -0.19
NOTCH4-204ENST00000474612 TAL2Q16559 108 aa13.87□□□□□ -0.19
NOTCH4-204ENST00000474612 DEFB135Q30KP9 77 aa13.87□□□□□ -0.19
NOTCH4-204ENST00000474612 EDA2RQ9HAV5 297 aa13.87□□□□□ -0.19
NOTCH4-204ENST00000474612 FSTL3O95633 263 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 SPINK8P0C7L1 97 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 C20orf144Q9BQM9 153 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 J3QQQ9 107 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 PATE2Q6UY27 113 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 EML6Q6ZMW3 1958 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 CRLF1O75462 422 aa13.86□□□□□ -0.19
NOTCH4-204ENST00000474612 RNASE13Q5GAN3 156 aaKnown RBP13.85□□□□□ -0.19
NOTCH4-204ENST00000474612 GAGE2EQ4V326 116 aa13.85□□□□□ -0.19
NOTCH4-204ENST00000474612 PYY3Q5JQD4 70 aa13.85□□□□□ -0.19
NOTCH4-204ENST00000474612 GAGE2DQ9UEU5 116 aa13.85□□□□□ -0.19
NOTCH4-204ENST00000474612 Q6YL49 198 aa13.85□□□□□ -0.19
NOTCH4-204ENST00000474612 SONP18583 2426 aaKnown RBP13.85□□□□□ -0.19
NOTCH4-204ENST00000474612 TM2D2Q9BX73 214 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 SOCS3O14543 225 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 MRPL52Q86TS9 123 aaKnown RBP13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 ODF3BA8MYP8 253 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 C9JAW5 83 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 C9orf47Q6ZRZ4 202 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 SLC25A29Q8N8R3 303 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 NCKAP5O14513 1909 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 INAFM2P0DMQ5 153 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 K7EN84 100 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
NOTCH4-204ENST00000474612 Q6ZWC4 215 aa13.83□□□□□ -0.2
NOTCH4-204ENST00000474612 IGHG4P01861 327 aa13.83□□□□□ -0.2
NOTCH4-204ENST00000474612 SUMO4Q6EEV6 95 aa13.83□□□□□ -0.2
NOTCH4-204ENST00000474612 GAGE2AQ6NT46 116 aa13.83□□□□□ -0.2
NOTCH4-204ENST00000474612 CAMK2N2Q96S95 79 aa13.83□□□□□ -0.2
NOTCH4-204ENST00000474612 HHLA3Q9XRX5 114 aa13.83□□□□□ -0.2
NOTCH4-204ENST00000474612 INAFM1C9JVW0 142 aa13.82□□□□□ -0.2
NOTCH4-204ENST00000474612 IGHV3-30P01768 117 aa13.82□□□□□ -0.2
NOTCH4-204ENST00000474612 IGHV3-33P01772 117 aa13.82□□□□□ -0.2
NOTCH4-204ENST00000474612 IGHV3-30-3P0DP02 117 aa13.82□□□□□ -0.2
NOTCH4-204ENST00000474612 IGHV3-30-5P0DP03 117 aa13.82□□□□□ -0.2
NOTCH4-204ENST00000474612 TRBV20-1A0A075B6N2 111 aa13.82□□□□□ -0.2
NOTCH4-204ENST00000474612 Q8N1Y9 231 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 ATRXP46100 2492 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 HERV-K104P63124 156 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 GAGE2BQ13066 116 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 AMTNQ6UX39 209 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 SIGMAR1Q99720 223 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 SHISA2Q6UWI4 295 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 C5orf38Q86SI9 138 aa13.81□□□□□ -0.2
NOTCH4-204ENST00000474612 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
NOTCH4-204ENST00000474612 LINC00574Q9H8X3 128 aa13.8□□□□□ -0.2
NOTCH4-204ENST00000474612 RBMY1FQ15415 496 aaKnown RBP13.8□□□□□ -0.2
NOTCH4-204ENST00000474612 COX7A2LO14548 114 aa13.8□□□□□ -0.2
NOTCH4-204ENST00000474612 ESM1Q9NQ30 184 aa13.8□□□□□ -0.2
NOTCH4-204ENST00000474612 FANCD2OSQ96PS1 177 aa13.8□□□□□ -0.2
NOTCH4-204ENST00000474612 SPRY2O43597 315 aa13.79□□□□□ -0.2
NOTCH4-204ENST00000474612 ZNF664Q8N3J9 261 aa13.79□□□□□ -0.2
NOTCH4-204ENST00000474612 MED14OSP0DP75 135 aa13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 RPL18AQ02543 176 aaKnown RBP13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 MORN5Q5VZ52 161 aa13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 ZNF503Q96F45 646 aa13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 OCIAD2Q56VL3 154 aa13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 C10orf91Q5T1B1 145 aa13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 TRBV7-3A0A075B6L6 115 aa13.78□□□□□ -0.2
NOTCH4-204ENST00000474612 IGF1P05019 195 aa13.77□□□□□ -0.2
NOTCH4-204ENST00000474612 UNQ9165/PRO28630Q6UXU0 137 aa13.77□□□□□ -0.2
NOTCH4-204ENST00000474612 BOD1L2Q8IYS8 172 aa13.77□□□□□ -0.2
NOTCH4-204ENST00000474612 A0A0J9YX75 114 aa13.77□□□□□ -0.2
NOTCH4-204ENST00000474612 PRAC2D3DTV9 90 aa13.77□□□□□ -0.2
NOTCH4-204ENST00000474612 FAM167A-AS1Q96KT0 104 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms