RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ZNF506Q5JVG8 444 aa13.76□□□□□ -0.21
PDLIM4-206ENST00000474421 OR2T35Q8NGX2 323 aa13.76□□□□□ -0.21
PDLIM4-206ENST00000474421 RNASE3P12724 160 aaKnown RBP13.75□□□□□ -0.21
PDLIM4-206ENST00000474421 PIK3CD-AS1Q5SR53 167 aa13.75□□□□□ -0.21
PDLIM4-206ENST00000474421 AKR1C8PQ5T2L2 129 aa13.75□□□□□ -0.21
PDLIM4-206ENST00000474421 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
PDLIM4-206ENST00000474421 PGPEP1LA6NFU8 196 aa13.74□□□□□ -0.21
PDLIM4-206ENST00000474421 FABP5P3A8MUU1 101 aa13.74□□□□□ -0.21
PDLIM4-206ENST00000474421 S100A4P26447 101 aaKnown RBP13.74□□□□□ -0.21
PDLIM4-206ENST00000474421 OR10J3Q5JRS4 329 aa13.74□□□□□ -0.21
PDLIM4-206ENST00000474421 HIST1H2BAQ96A08 127 aa13.74□□□□□ -0.21
PDLIM4-206ENST00000474421 ARL2-SNX15V9GYD0 113 aa13.74□□□□□ -0.21
PDLIM4-206ENST00000474421 IGHV3-73A0A0B4J1V6 119 aa13.73□□□□□ -0.21
PDLIM4-206ENST00000474421 TRAV34A0A0B4J273 112 aa13.73□□□□□ -0.21
PDLIM4-206ENST00000474421 A8MWV9 139 aa13.73□□□□□ -0.21
PDLIM4-206ENST00000474421 PEX7O00628 323 aa13.73□□□□□ -0.21
PDLIM4-206ENST00000474421 ZNF726P1Q15940 193 aa13.73□□□□□ -0.21
PDLIM4-206ENST00000474421 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
PDLIM4-206ENST00000474421 PSCAO43653 123 aa13.72□□□□□ -0.21
PDLIM4-206ENST00000474421 ASIPP42127 132 aa13.72□□□□□ -0.21
PDLIM4-206ENST00000474421 UBE2G2P60604 165 aa13.72□□□□□ -0.21
PDLIM4-206ENST00000474421 LELP1Q5T871 98 aa13.72□□□□□ -0.21
PDLIM4-206ENST00000474421 ZFP2Q6ZN57 461 aa13.72□□□□□ -0.21
PDLIM4-206ENST00000474421 GTSF1LQ9H1H1 148 aa13.72□□□□□ -0.21
PDLIM4-206ENST00000474421 IGKV3D-20A0A0C4DH25 116 aa13.71□□□□□ -0.21
PDLIM4-206ENST00000474421 FAM74A7A6NL05 159 aa13.71□□□□□ -0.21
PDLIM4-206ENST00000474421 IBA57-AS1B1ANH7 110 aa13.71□□□□□ -0.21
PDLIM4-206ENST00000474421 Q86TA4 180 aa13.71□□□□□ -0.21
PDLIM4-206ENST00000474421 ATP6V0E2Q8NHE4 81 aa13.71□□□□□ -0.21
PDLIM4-206ENST00000474421 FUSP35637 526 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDLIM4-206ENST00000474421 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
PDLIM4-206ENST00000474421 PARLQ9H300 379 aa13.7□□□□□ -0.22
PDLIM4-206ENST00000474421 IL36BQ9NZH7 164 aa13.7□□□□□ -0.22
PDLIM4-206ENST00000474421 ZFP30Q9Y2G7 519 aa13.7□□□□□ -0.22
PDLIM4-206ENST00000474421 B4DEV8 164 aa13.69□□□□□ -0.22
PDLIM4-206ENST00000474421 FGF8P55075 233 aaPredicted RBP13.69□□□□□ -0.22
PDLIM4-206ENST00000474421 RGS21Q2M5E4 152 aa13.69□□□□□ -0.22
PDLIM4-206ENST00000474421 TCEAL7Q9BRU2 100 aa13.69□□□□□ -0.22
PDLIM4-206ENST00000474421 MAP1LC3B2A6NCE7 125 aa13.68□□□□□ -0.22
PDLIM4-206ENST00000474421 STOML3Q8TAV4 291 aa13.68□□□□□ -0.22
PDLIM4-206ENST00000474421 FMC1Q96HJ9 113 aa13.68□□□□□ -0.22
PDLIM4-206ENST00000474421 MAP1LC3BQ9GZQ8 125 aa13.68□□□□□ -0.22
PDLIM4-206ENST00000474421 EPM2AB3EWF7 344 aa13.67□□□□□ -0.22
PDLIM4-206ENST00000474421 ARPC5O15511 151 aa13.67□□□□□ -0.22
PDLIM4-206ENST00000474421 GCSHP23434 173 aa13.67□□□□□ -0.22
PDLIM4-206ENST00000474421 DNLZQ5SXM8 178 aa13.67□□□□□ -0.22
PDLIM4-206ENST00000474421 COX8CQ7Z4L0 72 aa13.67□□□□□ -0.22
PDLIM4-206ENST00000474421 SYT8Q8NBV8 401 aa13.67□□□□□ -0.22
PDLIM4-206ENST00000474421 G3V3Q6 166 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 RHODO00212 210 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 IGHV3-30P01768 117 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 IGHV3-33P01772 117 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 IGHV3-30-3P0DP02 117 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 IGHV3-30-5P0DP03 117 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 FHITP49789 147 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 UBE2G1P62253 170 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 LAGE3Q14657 143 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 FAM162BQ5T6X4 162 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 NTN5Q8WTR8 489 aaPredicted RBP13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 CYTL1Q9NRR1 136 aa13.66□□□□□ -0.22
PDLIM4-206ENST00000474421 KRBOX1C9JBD0 128 aa13.65□□□□□ -0.22
PDLIM4-206ENST00000474421 H3BVH4 76 aa13.65□□□□□ -0.22
PDLIM4-206ENST00000474421 KRTAP10-1P60331 282 aa13.65□□□□□ -0.22
PDLIM4-206ENST00000474421 ZC2HC1AQ96GY0 325 aa13.65□□□□□ -0.22
PDLIM4-206ENST00000474421 Q9HAA7 133 aa13.65□□□□□ -0.22
PDLIM4-206ENST00000474421 A0A087WWC5 75 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 TRBV6-1A0A0K0K1D8 114 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 XGP55808 180 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 Q6ZSN1 163 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 OR11H4Q8NGC9 324 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 TM2D2Q9BX73 214 aa13.64□□□□□ -0.23
PDLIM4-206ENST00000474421 IGLV5-52A0A0A0MRZ9 124 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 M0R036 132 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 SH2D1AO60880 128 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 ARMS2P0C7Q2 107 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 LINC00694P0DN24 101 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 CRIP1P50238 77 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 GAGE1Q13065 139 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 GAGE4Q13068 117 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 GAGE5Q13069 117 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 CST9LP1Q5W188 147 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 UFSP1Q6NVU6 142 aa13.63□□□□□ -0.23
PDLIM4-206ENST00000474421 ZNF674Q2M3X9 581 aa13.62□□□□□ -0.23
PDLIM4-206ENST00000474421 PHLDA3Q9Y5J5 127 aa13.62□□□□□ -0.23
PDLIM4-206ENST00000474421 LTAP01374 205 aa13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 TPT1P13693 172 aaKnown RBP13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 ZNF345Q14585 488 aa13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 TOR2AQ5JU69 321 aa13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 SAMD10Q9BYL1 202 aa13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 JPT2Q9H910 190 aa13.61□□□□□ -0.23
PDLIM4-206ENST00000474421 TRAV8-3A0A0A6YYJ7 113 aa13.6□□□□□ -0.23
PDLIM4-206ENST00000474421 AKR1C3P42330 323 aa13.6□□□□□ -0.23
PDLIM4-206ENST00000474421 C14orf178Q8N769 122 aaPredicted RBP13.6□□□□□ -0.23
PDLIM4-206ENST00000474421 Q8N814 137 aa13.6□□□□□ -0.23
PDLIM4-206ENST00000474421 FRZBQ92765 325 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms