RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 ODF3Q96PU9 254 aa7.73□□□□□ -1.17
SEMA4D-216ENST00000474258 SMCO4Q9NRQ5 59 aa7.73□□□□□ -1.17
SEMA4D-216ENST00000474258 ZNF492Q9P255 531 aa7.73□□□□□ -1.17
SEMA4D-216ENST00000474258 LINC00588Q9Y4M8 146 aa7.73□□□□□ -1.17
SEMA4D-216ENST00000474258 LENEPQ9Y5L5 61 aa7.73□□□□□ -1.17
SEMA4D-216ENST00000474258 PKD1P98161 4303 aa7.73□□□□□ -1.17
SEMA4D-216ENST00000474258 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 C19orf71A6NCJ1 209 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 SNURFLB1AK76 121 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 J3KRW8 73 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 ZNF138P52744 262 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 ERCC8Q13216 396 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 ZNF575Q86XF7 245 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 C6orf223Q8N319 242 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 LINC00612Q8N6U2 182 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 OR10G8Q8NGN5 311 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 FAM19A4Q96LR4 140 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 IMMP2LQ96T52 175 aa7.72□□□□□ -1.17
SEMA4D-216ENST00000474258 PCLOQ9Y6V0 5065 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 TRAV12-3A0A0B4J271 114 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 GAGE7O76087 117 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 GAGE12FP0CL80 117 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 GAGE12GP0CL81 117 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 GAGE12IP0CL82 117 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 CT45A10P0DMU9 189 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 MGST1P10620 155 aaKnown RBP7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 CRIP1P50238 77 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 TNP2Q05952 138 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 BTN1A1Q13410 526 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 TMEM78Q5T7P6 136 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 C15orf54Q8N8G6 183 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 NHLRC2Q8NBF2 726 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 PYGO2Q9BRQ0 406 aa7.71□□□□□ -1.18
SEMA4D-216ENST00000474258 TRAV26-1A0A087WT03 109 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 PFN1P07737 140 aaKnown RBP7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 CRISP2P16562 243 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 ERVFC1-1P60608 527 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 NUDT10Q8NFP7 164 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 NUDT11Q96G61 164 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 ZC2HC1AQ96GY0 325 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 YPEL4Q96NS1 127 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 Q9H8V8 135 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 V9GYV3 84 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
SEMA4D-216ENST00000474258 A0A0J9YY99 117 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 C7orf71A4D174 169 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 C16orf90A8MZG2 172 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 H3BNG1 76 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 DAZ2Q13117 558 aaKnown RBP7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 IBA57Q5T440 356 aaKnown RBP7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 CBLN2Q8IUK8 224 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 Q8TAT8 98 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 C8orf49Q96NF6 230 aa7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 RNASE7Q9H1E1 156 aaKnown RBP7.69□□□□□ -1.18
SEMA4D-216ENST00000474258 COLCA2A8K830 154 aa7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 GATCO43716 136 aaKnown RBP7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 HOXA5P20719 270 aa7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 ZNF80P51504 273 aaPredicted RBP7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 CT83Q5H943 113 aa7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 TTC32Q5I0X7 151 aa7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 ZFAND2AQ8N6M9 145 aa7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 DAZAP1Q96EP5 407 aaKnown RBP7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 IL36BQ9NZH7 164 aa7.68□□□□□ -1.18
SEMA4D-216ENST00000474258 TRBV24-1A0A075B6N3 115 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 FABP5P3A8MUU1 101 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 KLLNB2CW77 178 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 ZNF324O75467 553 aaPredicted RBP7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 P01737 135 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 ESRGQ1W209 222 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 FAM162BQ5T6X4 162 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 PRR27Q6MZM9 219 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 Q6ZTI0 123 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 UPK3BQ9BT76 320 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 GSN-AS1Q9NRJ2 163 aa7.67□□□□□ -1.18
SEMA4D-216ENST00000474258 TRGV2A0A075B6R0 118 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 SMIM27A0A1W2PRY6 76 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 FAM231BA6NCW3 169 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 SH2D1AO60880 128 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 GPX1P07203 203 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 RNASE4P34096 147 aaKnown RBP7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 FOXA3P55318 350 aaPredicted RBP7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 ELOBQ15370 118 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 ANXA2RQ3ZCQ2 193 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 C18orf15Q96N68 181 aa7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 MRPS16Q9Y3D3 137 aaKnown RBP7.66□□□□□ -1.18
SEMA4D-216ENST00000474258 A8MWL6 223 aa7.65□□□□□ -1.18
SEMA4D-216ENST00000474258 S100PP25815 95 aa7.65□□□□□ -1.18
SEMA4D-216ENST00000474258 Q6AWC8 147 aa7.65□□□□□ -1.18
SEMA4D-216ENST00000474258 KCNIP4Q6PIL6 250 aa7.65□□□□□ -1.18
SEMA4D-216ENST00000474258 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.18
SEMA4D-216ENST00000474258 GFRA4Q9GZZ7 299 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms