RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 GNRH2O43555 120 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 NXPH4O95158 308 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 SLAQ13239 276 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 Q8N1Y9 231 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 SYT8Q8NBV8 401 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 OR10AG1Q8NH19 301 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 TP53TG3Q9ULZ0 132 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 GOLT1BQ9Y3E0 138 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 VWFP04275 2813 aa9.39□□□□□ -0.91
VPS13D-205ENST00000473099 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 FAM104BQ5XKR9 115 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 LINC01587Q99440 93 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
VPS13D-205ENST00000473099 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
VPS13D-205ENST00000473099 KIR2DL5BA0A0G2JN68 375 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 KIR2DL5BA0A0G2JPC4 375 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
VPS13D-205ENST00000473099 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
VPS13D-205ENST00000473099 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
VPS13D-205ENST00000473099 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 COA6Q5JTJ3 125 aaKnown RBP9.37□□□□□ -0.91
VPS13D-205ENST00000473099 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 KIR2DL5AQ8N109 375 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
VPS13D-205ENST00000473099 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
VPS13D-205ENST00000473099 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 C5orf52A6NGY3 159 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 M0R381 172 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 PPBPP02775 128 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 NDUFA6P56556 154 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 Q0VG73 95 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 PTH2Q96A98 100 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 SPXQ9BT56 116 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 NDUFAF3Q9BU61 184 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 CSTL1Q9H114 145 aa9.36□□□□□ -0.91
VPS13D-205ENST00000473099 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 SRIP30626 198 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 APOC4P55056 127 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 SSTP61278 116 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 KIAA1644Q3SXP7 199 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 ALKBH7Q9BT30 221 aaPredicted RBP9.35□□□□□ -0.91
VPS13D-205ENST00000473099 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
VPS13D-205ENST00000473099 SMIM17P0DL12 118 aa9.34□□□□□ -0.91
VPS13D-205ENST00000473099 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
VPS13D-205ENST00000473099 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
VPS13D-205ENST00000473099 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
VPS13D-205ENST00000473099 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
VPS13D-205ENST00000473099 MSRB1Q9NZV6 116 aa9.34□□□□□ -0.91
VPS13D-205ENST00000473099 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
VPS13D-205ENST00000473099 M0R2P5 195 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 UBE2CO00762 179 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 GIG44P09565 113 aaPredicted RBP9.33□□□□□ -0.92
VPS13D-205ENST00000473099 HTN1P15515 57 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 RAB4AP20338 218 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 HOXA5P20719 270 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 MRPL51Q4U2R6 128 aaKnown RBP9.33□□□□□ -0.92
VPS13D-205ENST00000473099 BAGE3Q86Y29 109 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 RCHY1Q96PM5 261 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 U3KQK5 164 aa9.33□□□□□ -0.92
VPS13D-205ENST00000473099 EVI2AP22794 236 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 CKS2P33552 79 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 ZNF705AQ6ZN79 300 aaPredicted RBP9.32□□□□□ -0.92
VPS13D-205ENST00000473099 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 MRAP2Q96G30 205 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 C16orf74Q96GX8 76 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 MEGF8Q7Z7M0 2845 aa9.32□□□□□ -0.92
VPS13D-205ENST00000473099 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 PPP1R17O96001 155 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 RRN3P1Q2M238 152 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 GSN-AS1Q9NRJ2 163 aa9.31□□□□□ -0.92
VPS13D-205ENST00000473099 LOC105371267A0A1B0GV96 52 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 A8MWV9 139 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 A8MZ25 164 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 D6R8Y8 96 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 S100A2P29034 98 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 POM121L12Q8N7R1 296 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 RNASE8Q8TDE3 154 aaKnown RBP9.3□□□□□ -0.92
VPS13D-205ENST00000473099 TRRAPQ9Y4A5 3859 aa9.3□□□□□ -0.92
VPS13D-205ENST00000473099 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
VPS13D-205ENST00000473099 ESDP10768 282 aa9.29□□□□□ -0.92
VPS13D-205ENST00000473099 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
VPS13D-205ENST00000473099 LGALS9BQ3B8N2 356 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms