RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 CRXO43186 299 aaPredicted RBP7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 MED14OSP0DP75 135 aa7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 CACNG7P62955 275 aa7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 MUC21Q5SSG8 566 aa7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 DNLZQ5SXM8 178 aa7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 SMIM15Q7Z3B0 74 aa7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 PGLYRP4Q96LB8 373 aa7.66□□□□□ -1.18
SMARCD3-208ENST00000472789 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 COLCA2A8K830 154 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 MT-ND6P03923 174 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 GZMBP10144 247 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 RAB5AP20339 215 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 KIR3DS1Q14943 382 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 LYZL1Q6UWQ5 148 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 GTSF1Q8WW33 167 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
SMARCD3-208ENST00000472789 TGIF2-C20orf24A0A0A6YYL0 155 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 TYMSP04818 313 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 HTN1P15515 57 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 CTRLP40313 264 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 RPS10P46783 165 aaKnown RBP7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 HBBP68871 147 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 SPANXN1Q5VSR9 72 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 SYT8Q8NBV8 401 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 EDA2RQ9HAV5 297 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 C11orf21Q9P2W6 132 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 CSMD3Q7Z407 3707 aa7.64□□□□□ -1.19
SMARCD3-208ENST00000472789 IGHV4-28A0A0C4DH34 117 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 SMIM9A6NGZ8 99 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 GNRH2O43555 120 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 SNAI2O43623 268 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 SPINK4O60575 86 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 ARMS2P0C7Q2 107 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 RAB4BP61018 213 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 TWIST1Q15672 202 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 MRPL54Q6P161 138 aaKnown RBP7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 ZNF493Q6ZR52 646 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 YPEL4Q96NS1 127 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 SPXQ9BT56 116 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 GNB1LQ9BYB4 327 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 X6R8D5 127 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 STARD9Q9P2P6 4700 aa7.63□□□□□ -1.19
SMARCD3-208ENST00000472789 H3BVH4 76 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 HLA-DQA1P01909 254 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 MIFP14174 115 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 NTF3P20783 257 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 EMP1P54849 157 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 RRN3P1Q2M238 152 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 ZFAND6Q6FIF0 208 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 ZFP82Q8N141 532 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 MUC7Q8TAX7 377 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 TP53TG3Q9ULZ0 132 aa7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 TIMM8BQ9Y5J9 83 aaPredicted RBP7.62□□□□□ -1.19
SMARCD3-208ENST00000472789 IGHV4-4A0A075B6R2 117 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 IGHV3-16A0A0C4DH30 117 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 SNURFLB1AK76 121 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 CAMPP49913 170 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 ZNF705AQ6ZN79 300 aaPredicted RBP7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 Q6ZQT7 251 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 IL17DQ8TAD2 202 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 TMEM263Q8WUH6 116 aaKnown RBP7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 FRZBQ92765 325 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 C16orf74Q96GX8 76 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 NDUFAF3Q9BU61 184 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
SMARCD3-208ENST00000472789 C1orf196B1AJZ1 125 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 RBMY1A1P0DJD3 496 aaKnown RBP7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 RBMY1CP0DJD4 496 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 SMIM17P0DL12 118 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 RBMY1FQ15415 496 aaKnown RBP7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 PIK3CD-AS1Q5SR53 167 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 Q8NAQ8 132 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 SCRT2Q9NQ03 307 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 HYDINQ4G0P3 5121 aa7.6□□□□□ -1.19
SMARCD3-208ENST00000472789 A0A1B0GXF2 115 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 M0R2P5 195 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 M0R381 172 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 APCSP02743 223 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 PRM2P04554 102 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 RAB5BP61020 215 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 SSTP61278 116 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 FABP9Q0Z7S8 132 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 PLECQ15149 4684 aaKnown RBP7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 ZNF575Q86XF7 245 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 PTH2Q96A98 100 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 C9orf85Q96MD7 179 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 AP1S3Q96PC3 154 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 TMEM191AQ9H0A3 160 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms