RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ZNF506Q5JVG8 444 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 OR10G9Q8NGN4 311 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 PTH2Q96A98 100 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 TVP23CQ96ET8 276 aa12.19□□□□□ -0.46
SORT1-203ENST00000471996 PGPEP1LA6NFU8 196 aa12.18□□□□□ -0.46
SORT1-203ENST00000471996 RAB32Q13637 225 aa12.18□□□□□ -0.46
SORT1-203ENST00000471996 HYLS1Q96M11 299 aa12.18□□□□□ -0.46
SORT1-203ENST00000471996 C9orf85Q96MD7 179 aa12.18□□□□□ -0.46
SORT1-203ENST00000471996 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
SORT1-203ENST00000471996 Q9UF83 564 aa12.18□□□□□ -0.46
SORT1-203ENST00000471996 PANO1I0J062 215 aa12.17□□□□□ -0.46
SORT1-203ENST00000471996 S100A10P60903 97 aa12.17□□□□□ -0.46
SORT1-203ENST00000471996 ELOBQ15370 118 aa12.17□□□□□ -0.46
SORT1-203ENST00000471996 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 FGF8P55075 233 aaPredicted RBP12.16□□□□□ -0.46
SORT1-203ENST00000471996 DEFA1P59665 94 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 DEFA3P59666 94 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
SORT1-203ENST00000471996 CYCSP99999 105 aaKnown RBP12.16□□□□□ -0.46
SORT1-203ENST00000471996 Q0VG73 95 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 ZFP2Q6ZN57 461 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 C9orf163Q8N9P6 203 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 SAMD10Q9BYL1 202 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 NMES1Q9C002 83 aa12.16□□□□□ -0.46
SORT1-203ENST00000471996 A0A087WX48 190 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 GAS8-AS1O95177 125 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 IFITM3Q01628 133 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 OR2T35Q8NGX2 323 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 THAP6Q8TBB0 222 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 MARVELD1Q9BSK0 173 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 PARLQ9H300 379 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 DPH3P1Q9H4G8 78 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 C11orf21Q9P2W6 132 aa12.15□□□□□ -0.46
SORT1-203ENST00000471996 GOLT1AQ6ZVE7 132 aa12.14□□□□□ -0.47
SORT1-203ENST00000471996 CMTM2Q8TAZ6 248 aa12.14□□□□□ -0.47
SORT1-203ENST00000471996 OTORQ9NRC9 128 aa12.14□□□□□ -0.47
SORT1-203ENST00000471996 PGPA6NDG6 321 aa12.13□□□□□ -0.47
SORT1-203ENST00000471996 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
SORT1-203ENST00000471996 PRSS1P07477 247 aa12.13□□□□□ -0.47
SORT1-203ENST00000471996 ODF1Q14990 250 aa12.13□□□□□ -0.47
SORT1-203ENST00000471996 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
SORT1-203ENST00000471996 A8MWV9 139 aa12.12□□□□□ -0.47
SORT1-203ENST00000471996 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
SORT1-203ENST00000471996 KCNIP4Q6PIL6 250 aa12.12□□□□□ -0.47
SORT1-203ENST00000471996 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
SORT1-203ENST00000471996 C14orf178Q8N769 122 aaPredicted RBP12.12□□□□□ -0.47
SORT1-203ENST00000471996 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
SORT1-203ENST00000471996 TAAR5O14804 337 aa12.11□□□□□ -0.47
SORT1-203ENST00000471996 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
SORT1-203ENST00000471996 FAM74A1Q5RGS3 127 aa12.11□□□□□ -0.47
SORT1-203ENST00000471996 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
SORT1-203ENST00000471996 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
SORT1-203ENST00000471996 ARL6IP6Q8N6S5 226 aa12.11□□□□□ -0.47
SORT1-203ENST00000471996 KCNIP2Q9NS61 270 aa12.11□□□□□ -0.47
SORT1-203ENST00000471996 NHLH2Q02577 135 aa12.1□□□□□ -0.47
SORT1-203ENST00000471996 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
SORT1-203ENST00000471996 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
SORT1-203ENST00000471996 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
SORT1-203ENST00000471996 SIX6O95475 246 aa12.09□□□□□ -0.47
SORT1-203ENST00000471996 RPL19P84098 196 aaKnown RBP12.09□□□□□ -0.47
SORT1-203ENST00000471996 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
SORT1-203ENST00000471996 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
SORT1-203ENST00000471996 OR5C1Q8NGR4 320 aa12.09□□□□□ -0.47
SORT1-203ENST00000471996 PET100P0DJ07 73 aa12.08□□□□□ -0.48
SORT1-203ENST00000471996 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
SORT1-203ENST00000471996 NDFIP1Q9BT67 221 aa12.08□□□□□ -0.48
SORT1-203ENST00000471996 WDR61Q9GZS3 305 aaKnown RBP12.08□□□□□ -0.48
SORT1-203ENST00000471996 MBD2Q9UBB5 411 aa12.08□□□□□ -0.48
SORT1-203ENST00000471996 SSNA1O43805 119 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 CRPP02741 224 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 TAS2R45P59539 299 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 SGK494Q96LW2 274 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 JPT2Q9H910 190 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 OR5AC2Q9NZP5 309 aa12.07□□□□□ -0.48
SORT1-203ENST00000471996 C17orf112F2Z3M2 114 aa12.06□□□□□ -0.48
SORT1-203ENST00000471996 GCGP01275 180 aa12.06□□□□□ -0.48
SORT1-203ENST00000471996 GNG5P63218 68 aa12.06□□□□□ -0.48
SORT1-203ENST00000471996 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
SORT1-203ENST00000471996 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
SORT1-203ENST00000471996 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
SORT1-203ENST00000471996 LPAP08519 4548 aa12.05□□□□□ -0.48
SORT1-203ENST00000471996 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
SORT1-203ENST00000471996 H0YIZ8 118 aa12.05□□□□□ -0.48
SORT1-203ENST00000471996 H2BFSP57053 126 aa12.05□□□□□ -0.48
SORT1-203ENST00000471996 C15orf54Q8N8G6 183 aa12.05□□□□□ -0.48
SORT1-203ENST00000471996 EIF3GO75821 320 aaKnown RBP eCLIP12.04□□□□□ -0.48
SORT1-203ENST00000471996 MPC2O95563 127 aa12.04□□□□□ -0.48
SORT1-203ENST00000471996 A0A087WYN8 130 aa12.03□□□□□ -0.48
SORT1-203ENST00000471996 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
SORT1-203ENST00000471996 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
SORT1-203ENST00000471996 KRTAP9-2Q9BYQ4 174 aa12.03□□□□□ -0.48
SORT1-203ENST00000471996 A0A0J9YXV3 536 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms