RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 SMIM20Q8N5G0 67 aa-1.51□□□□□ -2.65
PRPF40A-207ENST00000471701 OR4S1Q8NGB4 309 aa-1.51□□□□□ -2.65
PRPF40A-207ENST00000471701 ACANP16112 2415 aa-1.51□□□□□ -2.65
PRPF40A-207ENST00000471701 TRAV13-1A0A0B4J241 112 aa-1.52□□□□□ -2.65
PRPF40A-207ENST00000471701 IGHV1-24A0A0C4DH33 117 aa-1.52□□□□□ -2.65
PRPF40A-207ENST00000471701 APOC1P02654 83 aa-1.52□□□□□ -2.65
PRPF40A-207ENST00000471701 SPRR2BP35325 72 aa-1.52□□□□□ -2.65
PRPF40A-207ENST00000471701 GNG3P63215 75 aa-1.52□□□□□ -2.65
PRPF40A-207ENST00000471701 Q6ZRX8 168 aa-1.52□□□□□ -2.65
PRPF40A-207ENST00000471701 CRYGSP22914 178 aa-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 S100A11P31949 105 aa-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 CKS2P33552 79 aa-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 MYH9P35579 1960 aaKnown RBP-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 Q5VSD8 79 aa-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 Q96NJ1 140 aa-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 LAMTOR3Q9UHA4 124 aa-1.53□□□□□ -2.65
PRPF40A-207ENST00000471701 CXorf51AA0A1B0GTR3 108 aa-1.54□□□□□ -2.66
PRPF40A-207ENST00000471701 RBAKDNA6NC62 111 aa-1.54□□□□□ -2.66
PRPF40A-207ENST00000471701 CRYBA4P53673 196 aa-1.54□□□□□ -2.66
PRPF40A-207ENST00000471701 DYDC1Q8WWB3 177 aa-1.54□□□□□ -2.66
PRPF40A-207ENST00000471701 PLXNA2O75051 1894 aa-1.54□□□□□ -2.66
PRPF40A-207ENST00000471701 ZNF142P52746 1687 aaPredicted RBP-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 TCRBV3S1A0A5B6 114 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 H3BMG7 143 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 IFNA21P01568 189 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 ACYP2P14621 99 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 TMED2Q15363 201 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 FAM74A4Q5TZK3 123 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 UBE2DNLQ8IWF7 75 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 FAM24BQ8N5W8 94 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 PLXNA1Q9UIW2 1896 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 C2CD3Q4AC94 2353 aa-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 SETXQ7Z333 2677 aaKnown RBP-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 FLNBO75369 2602 aaKnown RBP-1.55□□□□□ -2.66
PRPF40A-207ENST00000471701 FLGP20930 4061 aaPredicted RBP-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 PPP5D1E7EU14 171 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 HBDP02042 147 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 GCHFRP30047 84 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 KRTAP19-8Q3LI54 63 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 HRCT1Q6UXD1 115 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 DOCK11Q5JSL3 2073 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 WNK1Q9H4A3 2382 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 FER1L6Q2WGJ9 1857 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 GOLGA3Q08378 1498 aa-1.56□□□□□ -2.66
PRPF40A-207ENST00000471701 AKAP11Q9UKA4 1901 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 TRBV7-1A0A0A6YYK4 115 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 M0QZK8 103 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 S100A6P06703 90 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 SPRR1AP35321 89 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 CNFNQ9BYD5 112 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 PKHD1P08F94 4074 aa-1.57□□□□□ -2.66
PRPF40A-207ENST00000471701 NF1P21359 2839 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 STAB2Q8WWQ8 2551 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 MAP1LC3B2A6NCE7 125 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 CCL3L1P16619 93 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 OR2T2Q6IF00 324 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 CYP2G1PQ6ZSU1 146 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 CBLN4Q9NTU7 201 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 UFC1Q9Y3C8 167 aa-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 PRKDCP78527 4128 aaKnown RBP-1.58□□□□□ -2.66
PRPF40A-207ENST00000471701 TRBV7-6A0A0J9YX20 115 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 LOC107984640A0A0U1RRK4 108 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 TMEM14DPA8MWL7 114 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 SRP9P49458 86 aaKnown RBP-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 C4orf33Q8N1A6 199 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 BRK1Q8WUW1 75 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 PPDPFLQ8WWR9 84 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 LXNQ9BS40 222 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 NDUFAF1Q9Y375 327 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 FAT1Q14517 4588 aa-1.59□□□□□ -2.66
PRPF40A-207ENST00000471701 AKR1D1P51857 326 aa-1.6□□□□□ -2.67
PRPF40A-207ENST00000471701 PCBD1P61457 104 aa-1.6□□□□□ -2.67
PRPF40A-207ENST00000471701 INSL4Q14641 139 aa-1.6□□□□□ -2.67
PRPF40A-207ENST00000471701 Q8IZM0 81 aa-1.6□□□□□ -2.67
PRPF40A-207ENST00000471701 CASZ1Q86V15 1759 aa-1.6□□□□□ -2.67
PRPF40A-207ENST00000471701 CSPG4Q6UVK1 2322 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 KIF13AQ9H1H9 1805 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 PTPRMP28827 1452 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 ARAP1Q96P48 1450 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 TRGV1A0A0A0MS02 117 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 A0A0D9SFI3 127 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 A0A1B0GW64 132 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 G3V318 75 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 MRPS25P82663 173 aaKnown RBP-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 SLC48A1Q6P1K1 146 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 STX19Q8N4C7 294 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 LAMTOR2Q9Y2Q5 125 aa-1.61□□□□□ -2.67
PRPF40A-207ENST00000471701 YTHDC2Q9H6S0 1430 aaKnown RBP-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 TCTAP57738 103 aa-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 NPC2P61916 151 aa-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 LSM3P62310 102 aaKnown RBP-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 IFI27L1Q96BM0 104 aa-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 VPS25Q9BRG1 176 aa-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 LAMA5O15230 3695 aa-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 PHIPQ8WWQ0 1821 aa-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 SPTBN1Q01082 2364 aaKnown RBP-1.62□□□□□ -2.67
PRPF40A-207ENST00000471701 SLC25A5P05141 298 aaKnown RBP-1.63□□□□□ -2.67
PRPF40A-207ENST00000471701 SSBP1Q04837 148 aaKnown RBP-1.63□□□□□ -2.67
PRPF40A-207ENST00000471701 DCUN1D2Q6PH85 259 aa-1.63□□□□□ -2.67
PRPF40A-207ENST00000471701 SLC25A26Q70HW3 274 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms