RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 FAM159AQ6UWV7 190 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 AMTNQ6UX39 209 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 ZNF575Q86XF7 245 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 C20orf144Q9BQM9 153 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 MCRIP2Q9BUT9 160 aaKnown RBP4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 CNFNQ9BYD5 112 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 NBPF19A0A087WUL8 3843 aa4.49□□□□□ -1.69
SMNDC1-204ENST00000471297 ZANQ9Y493 2812 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 IGHV4-4A0A075B6R2 117 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 GRIFINA4D1Z8 144 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 J3KRW8 73 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 ZNF324O75467 553 aaPredicted RBP4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 IGKV3-20P01619 116 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 OR5AL1P0C617 328 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 ARMS2P0C7Q2 107 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 FRMD6-AS1P0C7T7 363 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 S100A4P26447 101 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 CAMPP49913 170 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 SNRPEP62304 92 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 Q0VG73 95 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 TDRG1Q3Y452 100 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 ANXA2RQ3ZCQ2 193 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 ZNF493Q6ZR52 646 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 SMIM15Q7Z3B0 74 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 STHQ8IWL8 128 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
SMNDC1-204ENST00000471297 VPS13CQ709C8 3753 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 TRAV12-3A0A0B4J271 114 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 UBE2CO00762 179 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 NTF3P20783 257 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 NUTF2P61970 127 aaKnown RBP4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 TWIST1Q15672 202 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 SPINK13Q1W4C9 94 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 KRTAP24-1Q3LI83 254 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 ODF3L2Q3SX64 289 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 OR10J3Q5JRS4 329 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 GFI1BQ5VTD9 330 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 WFDC9Q8NEX5 89 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 NAGKQ9UJ70 344 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 NOTCH2Q04721 2471 aa4.47□□□□□ -1.69
SMNDC1-204ENST00000471297 TLN2Q9Y4G6 2542 aa4.46□□□□□ -1.69
SMNDC1-204ENST00000471297 IGHV1OR15-1A0A075B7D0 117 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 M0R2Z0 102 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 CRXO43186 299 aaPredicted RBP4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 GNRH2O43555 120 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 SLAQ13239 276 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 SPANXN1Q5VSR9 72 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 FAM104BQ5XKR9 115 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 MORN3Q6PF18 240 aaPredicted RBP4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 Q6ZQT7 251 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 TRPT1Q86TN4 253 aaKnown RBP4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 C3orf56Q8N813 242 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 LINC00467Q9BRT7 94 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 TMEM191AQ9H0A3 160 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
SMNDC1-204ENST00000471297 MAP1AP78559 2803 aaPredicted RBP4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 FN1P02751 2386 aaKnown RBP4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 LOC102724200A0A096LPH7 203 aaPredicted RBP4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 RBMY1BA6NDE4 496 aaKnown RBP4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 RBMY1EA6NEQ0 496 aaKnown RBP4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 H3BVH4 76 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 INSP01308 110 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 PPBPP02775 128 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 CD7P09564 240 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 RBMY1DP0C7P1 496 aaKnown RBP4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 S100A2P29034 98 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 SRIP30626 198 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 FXYD7P58549 80 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 GTSCR1Q86UQ5 136 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 BAGE3Q86Y29 109 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 TMEM256Q8N2U0 113 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 TP53TG3Q9ULZ0 132 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 PHLDA3Q9Y5J5 127 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 MXRA5Q9NR99 2828 aa4.45□□□□□ -1.7
SMNDC1-204ENST00000471297 IGHV3-16A0A0C4DH30 117 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 CBY3A6NI87 242 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 NXPH4O95158 308 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 ESDP10768 282 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 RAB4AP20338 218 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 SSTP61278 116 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 MRPL51Q4U2R6 128 aaKnown RBP4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 PIK3CD-AS1Q5SR53 167 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 AMN1Q8IY45 258 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 HIST3H2BBQ8N257 126 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 OR10AG1Q8NH19 301 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 C18orf32Q8TCD1 76 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms