RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TP53TG3Q9ULZ0 132 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 MUC21A0A0G2JKD1 596 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 MUC21A0A140T8X8 626 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 COLCA2A8K830 154 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 SNAI2O43623 268 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 MT-ND6P03923 174 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 FRMD6-AS1P0C7T7 363 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 TRGC1P0CF51 173 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 SMIM17P0DL12 118 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 NTF3P20783 257 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 ZNF705AQ6ZN79 300 aaPredicted RBP7.1□□□□□ -1.27
CCM2-204ENST00000470837 CSNK1G2-AS1Q8NCQ2 148 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 FRZBQ92765 325 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
CCM2-204ENST00000470837 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
CCM2-204ENST00000470837 M0R2P5 195 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 SPRY2O43597 315 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 HLA-DQA1P01909 254 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 PRB2P02812 416 aaPredicted RBP7.09□□□□□ -1.27
CCM2-204ENST00000470837 RNASE3P12724 160 aaKnown RBP7.09□□□□□ -1.27
CCM2-204ENST00000470837 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 OR10AG1Q8NH19 301 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 AP1S3Q96PC3 154 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 GNB1LQ9BYB4 327 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 GSN-AS1Q9NRJ2 163 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 TRAPPC1Q9Y5R8 145 aa7.09□□□□□ -1.27
CCM2-204ENST00000470837 ZNF876PQ49A33 203 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 RNF183Q96D59 192 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 C9orf85Q96MD7 179 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 CNFNQ9BYD5 112 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 SCRT2Q9NQ03 307 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
CCM2-204ENST00000470837 AGRNO00468 2067 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 A0A1B0GXF2 115 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 C1orf196B1AJZ1 125 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 APCSP02743 223 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 MIFP14174 115 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 AZU1P20160 251 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 EMP1P54849 157 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 FABP9Q0Z7S8 132 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 MRAPQ8TCY5 172 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 RNASE8Q8TDE3 154 aaKnown RBP7.07□□□□□ -1.28
CCM2-204ENST00000470837 NDUFAF3Q9BU61 184 aa7.07□□□□□ -1.28
CCM2-204ENST00000470837 TRGV1A0A0A0MS02 117 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 K7EIL1 84 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 PRM2P04554 102 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 DAZ2Q13117 558 aaKnown RBP7.06□□□□□ -1.28
CCM2-204ENST00000470837 PIK3CD-AS1Q5SR53 167 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 DMRTA1Q5VZB9 504 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 ZNF575Q86XF7 245 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 C11orf72Q8NBR9 251 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 TMEM191AQ9H0A3 160 aa7.06□□□□□ -1.28
CCM2-204ENST00000470837 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
CCM2-204ENST00000470837 NOP10Q9NPE3 64 aaKnown RBP7.06□□□□□ -1.28
CCM2-204ENST00000470837 ANK2Q01484 3957 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 TRGV2A0A075B6R0 118 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 A8MWV9 139 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 NXPH4O95158 308 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 TRGC2P03986 189 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 RAB5BP61020 215 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 LGALS9BQ3B8N2 356 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 PTH2Q96A98 100 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 DPH3P1Q9H4G8 78 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 ZMAT4Q9H898 229 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 MRPL16Q9NX20 251 aaKnown RBP7.05□□□□□ -1.28
CCM2-204ENST00000470837 MSRB1Q9NZV6 116 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 MGAM2Q2M2H8 2515 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 PKD1L1Q8TDX9 2849 aa7.05□□□□□ -1.28
CCM2-204ENST00000470837 TEX48A0A1B0GUV7 120 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 F5H697 171 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 RHODO00212 210 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 MGPP08493 103 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 EVI2AP22794 236 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 FAM74A4Q5TZK3 123 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 C14orf178Q8N769 122 aaPredicted RBP7.04□□□□□ -1.28
CCM2-204ENST00000470837 RASL10AQ92737 203 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 X6R8D5 127 aa7.04□□□□□ -1.28
CCM2-204ENST00000470837 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 LYRM9A8MSI8 78 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 PPBPP02775 128 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 CKS2P33552 79 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 ZNF56Q15929 161 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 FAM104BQ5XKR9 115 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 AMN1Q8IY45 258 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 OR4C5Q8NGB2 326 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 OVOL2Q9BRP0 275 aa7.03□□□□□ -1.28
CCM2-204ENST00000470837 A0A087WWL8 130 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 GAGE12BA1L429 117 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 H7C1H1 209 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 CIDEAO60543 219 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 GAGE7O76087 117 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 PPP1R17O96001 155 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 GAGE12FP0CL80 117 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 GAGE12GP0CL81 117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms