RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 PARLQ9H300 379 aa11.78□□□□□ -0.52
TTC28-205ENST00000469670 NDUFA13Q9P0J0 144 aa11.78□□□□□ -0.52
TTC28-205ENST00000469670 Q9UF83 564 aa11.78□□□□□ -0.52
TTC28-205ENST00000469670 TNXBP22105 4242 aa11.77□□□□□ -0.52
TTC28-205ENST00000469670 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.53
TTC28-205ENST00000469670 ATRAIDQ6UW56 229 aa11.77□□□□□ -0.53
TTC28-205ENST00000469670 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
TTC28-205ENST00000469670 OR2T35Q8NGX2 323 aa11.77□□□□□ -0.53
TTC28-205ENST00000469670 SDHCQ99643 169 aaPredicted RBP11.77□□□□□ -0.53
TTC28-205ENST00000469670 SAMD10Q9BYL1 202 aa11.77□□□□□ -0.53
TTC28-205ENST00000469670 MBD2Q9UBB5 411 aa11.77□□□□□ -0.53
TTC28-205ENST00000469670 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
TTC28-205ENST00000469670 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
TTC28-205ENST00000469670 TAS2R45P59539 299 aa11.76□□□□□ -0.53
TTC28-205ENST00000469670 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
TTC28-205ENST00000469670 TRAV6A0A075B6T7 132 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 TAAR5O14804 337 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 EIF3GO75821 320 aaKnown RBP eCLIP11.75□□□□□ -0.53
TTC28-205ENST00000469670 RNASE3P12724 160 aaKnown RBP11.75□□□□□ -0.53
TTC28-205ENST00000469670 ELOBQ15370 118 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 TMEM75Q8N9X5 138 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 SGK494Q96LW2 274 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 NDFIP1Q9BT67 221 aa11.75□□□□□ -0.53
TTC28-205ENST00000469670 A0A087WX48 190 aa11.74□□□□□ -0.53
TTC28-205ENST00000469670 A8MWV9 139 aa11.74□□□□□ -0.53
TTC28-205ENST00000469670 GNG5P63218 68 aa11.74□□□□□ -0.53
TTC28-205ENST00000469670 FFAR4Q5NUL3 377 aa11.74□□□□□ -0.53
TTC28-205ENST00000469670 C14orf178Q8N769 122 aaPredicted RBP11.74□□□□□ -0.53
TTC28-205ENST00000469670 TCRBP04435 133 aa11.73□□□□□ -0.53
TTC28-205ENST00000469670 IL7P13232 177 aa11.73□□□□□ -0.53
TTC28-205ENST00000469670 ASIPP42127 132 aa11.73□□□□□ -0.53
TTC28-205ENST00000469670 Q0VG73 95 aa11.73□□□□□ -0.53
TTC28-205ENST00000469670 CHCHD7Q9BUK0 85 aa11.73□□□□□ -0.53
TTC28-205ENST00000469670 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
TTC28-205ENST00000469670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.73□□□□□ -0.53
TTC28-205ENST00000469670 CCDC160A6NGH7 325 aa11.72□□□□□ -0.53
TTC28-205ENST00000469670 GCGP01275 180 aa11.72□□□□□ -0.53
TTC28-205ENST00000469670 LGALSLQ3ZCW2 172 aaPredicted RBP11.72□□□□□ -0.53
TTC28-205ENST00000469670 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
TTC28-205ENST00000469670 PLA2G10O15496 165 aa11.71□□□□□ -0.53
TTC28-205ENST00000469670 PIK3CD-AS1Q5SR53 167 aa11.71□□□□□ -0.53
TTC28-205ENST00000469670 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
TTC28-205ENST00000469670 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.53
TTC28-205ENST00000469670 RBM38Q9H0Z9 239 aaKnown RBP11.71□□□□□ -0.53
TTC28-205ENST00000469670 JPT2Q9H910 190 aa11.71□□□□□ -0.53
TTC28-205ENST00000469670 NUDT15Q9NV35 164 aa11.71□□□□□ -0.53
TTC28-205ENST00000469670 A0A0D9SG52 128 aa11.7□□□□□ -0.54
TTC28-205ENST00000469670 PANO1I0J062 215 aa11.7□□□□□ -0.54
TTC28-205ENST00000469670 LYRM1O43325 122 aa11.7□□□□□ -0.54
TTC28-205ENST00000469670 OR5AC2Q9NZP5 309 aa11.7□□□□□ -0.54
TTC28-205ENST00000469670 USP17L23D6RBM5 183 aa11.69□□□□□ -0.54
TTC28-205ENST00000469670 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
TTC28-205ENST00000469670 C9orf163Q8N9P6 203 aa11.69□□□□□ -0.54
TTC28-205ENST00000469670 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 PRSS1P07477 247 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
TTC28-205ENST00000469670 SMUG1Q53HV7 270 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 ENHOQ6UWT2 76 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 ZC2HC1AQ96GY0 325 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
TTC28-205ENST00000469670 CRPP02741 224 aa11.67□□□□□ -0.54
TTC28-205ENST00000469670 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
TTC28-205ENST00000469670 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
TTC28-205ENST00000469670 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
TTC28-205ENST00000469670 H0YIZ8 118 aa11.66□□□□□ -0.54
TTC28-205ENST00000469670 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
TTC28-205ENST00000469670 H2AFB2P0C5Z0 115 aa11.66□□□□□ -0.54
TTC28-205ENST00000469670 LRRC37A5PQ49AS3 106 aa11.66□□□□□ -0.54
TTC28-205ENST00000469670 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 RHODO00212 210 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 TCRAP04437 139 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 HSD17B11Q8NBQ5 300 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
TTC28-205ENST00000469670 A0A1W2PPV4 95 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 K7EQM0 130 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 SIX6O95475 246 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 RPL19P84098 196 aaKnown RBP11.64□□□□□ -0.55
TTC28-205ENST00000469670 FAM74A4Q5TZK3 123 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 PRNTQ86SH4 94 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 C5orf17Q8NAS9 161 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
TTC28-205ENST00000469670 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
TTC28-205ENST00000469670 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
TTC28-205ENST00000469670 IL36BQ9NZH7 164 aa11.62□□□□□ -0.55
TTC28-205ENST00000469670 H3BVH4 76 aa11.61□□□□□ -0.55
TTC28-205ENST00000469670 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
TTC28-205ENST00000469670 UBE2D3P61077 147 aa11.61□□□□□ -0.55
TTC28-205ENST00000469670 UBE2D2P62837 147 aa11.61□□□□□ -0.55
TTC28-205ENST00000469670 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
TTC28-205ENST00000469670 CIRBPQ14011 172 aaKnown RBP11.61□□□□□ -0.55
TTC28-205ENST00000469670 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
TTC28-205ENST00000469670 SAPCD1Q5SSQ6 148 aa11.61□□□□□ -0.55
TTC28-205ENST00000469670 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
TTC28-205ENST00000469670 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms