RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CLVS1Q8IUQ0 354 aaPredicted RBP1.86□□□□□ -2.11
LSM5-209ENST00000468872 SKA2Q8WVK7 121 aaPredicted RBP1.86□□□□□ -2.11
LSM5-209ENST00000468872 ZC2HC1AQ96GY0 325 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 SLC39A9Q9NUM3 307 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 NAT8Q9UHE5 227 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 JPT1Q9UK76 154 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 HSPB11Q9Y547 144 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 MYH11P35749 1972 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
LSM5-209ENST00000468872 CPAMD8Q8IZJ3 1885 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 E7EQ34 232 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 H7C2G1 150 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 K7EIL1 84 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 CYB5BO43169 146 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 CREBL2O60519 120 aaPredicted RBP1.85□□□□□ -2.11
LSM5-209ENST00000468872 SHBGP04278 402 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 HMGN1P05114 100 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 ARPP19P56211 112 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 FAM27BQ5VT28 67 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 Q6ZS92 163 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 TMEM86AQ8N2M4 240 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 SIGLECL1Q8N7X8 197 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 RTL8AQ9BWD3 113 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 OR2J1Q9GZK6 312 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 PLXNA2O75051 1894 aa1.85□□□□□ -2.11
LSM5-209ENST00000468872 NUP210Q8TEM1 1887 aaPredicted RBP1.85□□□□□ -2.11
LSM5-209ENST00000468872 USH2AO75445 5202 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 A0A087X0T9 212 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 TMEM256-PLSCR3K7ERE1 68 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 APOA2P02652 100 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 C1QCP02747 245 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 STATHP02808 62 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 TRGC2P03986 189 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 OGNP20774 298 aaKnown RBP1.84□□□□□ -2.11
LSM5-209ENST00000468872 FKBP2P26885 142 aaKnown RBP1.84□□□□□ -2.11
LSM5-209ENST00000468872 EMP1P54849 157 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 YPEL3P61236 119 aaPredicted RBP1.84□□□□□ -2.11
LSM5-209ENST00000468872 HRCT1Q6UXD1 115 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 PRR15Q8IV56 129 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 HIST3H2BBQ8N257 126 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 OR8D4Q8NGM9 314 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 DNAJC9Q8WXX5 260 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 MAFIPQ8WZ33 124 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 TEX37Q96LM6 180 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 AIF1LQ9BQI0 150 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 TMEM126AQ9H061 195 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 MED11Q9P086 117 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 DOCK4Q8N1I0 1966 aa1.84□□□□□ -2.11
LSM5-209ENST00000468872 DNAH5Q8TE73 4624 aa1.84□□□□□ -2.12
LSM5-209ENST00000468872 PKD1P98161 4303 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 MYO18AQ92614 2054 aaKnown RBP1.83□□□□□ -2.12
LSM5-209ENST00000468872 TRDV1A0A1B0GX56 115 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 OR2T1O43869 369 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 CST8O60676 142 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 NAPSAO96009 420 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 NFYBP25208 207 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 S100A4P26447 101 aaKnown RBP1.83□□□□□ -2.12
LSM5-209ENST00000468872 DEFB133Q30KQ1 61 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 TRAPPC6BQ86SZ2 158 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 C10orf126Q8N4M7 172 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 HSPB9Q9BQS6 159 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 DOHHQ9BU89 302 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 CCDC32Q9BV29 185 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 C6orf62Q9GZU0 229 aaPredicted RBP1.83□□□□□ -2.12
LSM5-209ENST00000468872 OTORQ9NRC9 128 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 OSTCQ9NRP0 149 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 NUBP2Q9Y5Y2 271 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 MALRD1Q5VYJ5 2156 aa1.83□□□□□ -2.12
LSM5-209ENST00000468872 MYH1P12882 1939 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 TRBV10-2A0A0K0K1G8 114 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 MEIS3P1A6NDR6 274 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 SLC22A1O15245 554 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 ZNF737O75373 536 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 GPX1P07203 203 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 OR10J4P0C629 311 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 GPX2P18283 190 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 AQP4P55087 323 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 PSPHP78330 225 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 TMEM155Q4W5P6 130 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 DEFB121Q5J5C9 76 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 C1orf140Q5VVS0 124 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 DHFR2Q86XF0 187 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 OR9Q1Q8NGQ5 310 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 CANT1Q8WVQ1 401 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 MBD3L1Q8WWY6 194 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 MRPL32Q9BYC8 188 aaKnown RBP1.82□□□□□ -2.12
LSM5-209ENST00000468872 RASL12Q9NYN1 266 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 GSKIPQ9P0R6 139 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 RNF11Q9Y3C5 154 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 MED31Q9Y3C7 131 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 DNAH17Q9UFH2 4485 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
LSM5-209ENST00000468872 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
LSM5-209ENST00000468872 ODAMA1E959 279 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 ARL5CA6NH57 179 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 HMSDA8MTL9 139 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 PFDN1O60925 122 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 CRYGAP11844 174 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 EIF2B2P49770 351 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms