RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 LGALS1P09382 135 aaKnown RBP2.21□□□□□ -2.06
GPNMB-207ENST00000468723 SAA1P0DJI8 122 aaPredicted RBP2.21□□□□□ -2.06
GPNMB-207ENST00000468723 HIST1H1DP16402 221 aaKnown RBP2.21□□□□□ -2.06
GPNMB-207ENST00000468723 DDTP30046 118 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 SDC2P34741 201 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 SULT1A1P50225 295 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 GNG2P59768 71 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 ARPC4P59998 168 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 RANP62826 216 aaKnown RBP2.21□□□□□ -2.06
GPNMB-207ENST00000468723 C10orf91Q5T1B1 145 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 ZNF660Q6AZW8 331 aaPredicted RBP2.21□□□□□ -2.06
GPNMB-207ENST00000468723 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 TMEM136Q6ZRR5 245 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 BAP18Q8IXM2 172 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 DEFB125Q8N687 156 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 RNF182Q8N6D2 247 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 HIST1H2BAQ96A08 127 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 RMI2Q96E14 147 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 DIRAS2Q96HU8 199 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 C8orf4Q9NR00 106 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 SSR3Q9UNL2 185 aa2.21□□□□□ -2.06
GPNMB-207ENST00000468723 RYR2Q92736 4967 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 TGP01266 2768 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 A0A1B0GW64 132 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 LECT2O14960 151 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 SH2D1AO60880 128 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 CD7P09564 240 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 OR10J1P30954 320 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 LPAR6P43657 344 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 SERPINB10P48595 397 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 ZNF137PP52743 207 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 SPCS3P61009 180 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 NCS1P62166 190 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 RHOGP84095 191 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 RTL8BQ17RB0 113 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 FAM78BQ5VT40 261 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 AADACL3Q5VUY0 350 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 NIT1Q86X76 327 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 SNX29P2Q8IUI4 249 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 DYNLRB2Q8TF09 96 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 DGCR14Q96DF8 476 aaKnown RBP2.2□□□□□ -2.06
GPNMB-207ENST00000468723 ZNF2Q9BSG1 426 aaPredicted RBP2.2□□□□□ -2.06
GPNMB-207ENST00000468723 VCX3BQ9H321 246 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 TUBA4BQ9H853 241 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.2□□□□□ -2.06
GPNMB-207ENST00000468723 NDUFB11Q9NX14 153 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 COMMD3Q9UBI1 195 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 STARD9Q9P2P6 4700 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 MEGF8Q7Z7M0 2845 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 SACSQ9NZJ4 4579 aa2.2□□□□□ -2.06
GPNMB-207ENST00000468723 TNCP24821 2201 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 SORL1Q92673 2214 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 NOTCH1P46531 2555 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 IGKV1D-37A0A075B6S9 117 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 TRAV1-2A0A0B4J238 106 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 FAM25AB3EWG3 89 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 FAM25CB3EWG5 89 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 FAM25GB3EWG6 89 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 GSTZ1O43708 216 aaPredicted RBP2.19□□□□□ -2.06
GPNMB-207ENST00000468723 SLC25A20O43772 301 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 S1PR2O95136 353 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 PRB4P10163 310 aaPredicted RBP2.19□□□□□ -2.06
GPNMB-207ENST00000468723 DEFA4P12838 97 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 S100A5P33763 92 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 G6PCP35575 357 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 RPL27AP46776 148 aaKnown RBP2.19□□□□□ -2.06
GPNMB-207ENST00000468723 RAB5BP61020 215 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 VBP1P61758 197 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 IFITM2Q01629 132 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 TNFRSF9Q07011 255 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 CDK10Q15131 360 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 LGALSLQ3ZCW2 172 aaPredicted RBP2.19□□□□□ -2.06
GPNMB-207ENST00000468723 AKIRIN2Q53H80 203 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 DNLZQ5SXM8 178 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 C1orf194Q5T5A4 169 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 HACD4Q5VWC8 232 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 Q6ZQT7 251 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 ZNF818PQ6ZRF7 136 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 ZNF680Q8NEM1 530 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 MYOZ3Q8TDC0 251 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 LYSTQ99698 3801 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 FXYD6Q9H0Q3 95 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 DNAH1Q9P2D7 4330 aa2.19□□□□□ -2.06
GPNMB-207ENST00000468723 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
GPNMB-207ENST00000468723 OR2T8A6NH00 312 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 C2orf70A6NJV1 201 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 DEFB4AO15263 64 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 PPYP01298 95 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 IGLV1-51P01701 117 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 IGHV3-53P01767 116 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 TAS2R20P59543 309 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 RUNX1Q01196 453 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 BATFQ16520 125 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 Q56UQ5 140 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 LYZL2Q7Z4W2 148 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 TTC9CQ8N5M4 171 aa2.18□□□□□ -2.06
GPNMB-207ENST00000468723 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms