RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 LSM3P62310 102 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 SNRPD3P62318 126 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 ASB16-AS1Q495Z4 193 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 HSD17B12Q53GQ0 312 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 LINC00299Q6ZSB3 139 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 SNX29P2Q8IUI4 249 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 LINC00269Q8N2A0 174 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 Q8TAT8 98 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 MAGOHBQ96A72 148 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 PPP3R2Q96LZ3 170 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 PRELID3AQ96N28 172 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 OR4C12Q96R67 309 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 AMELYQ99218 206 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 PSMG3Q9BT73 122 aaPredicted RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 SNRNP25Q9BV90 132 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 CST11Q9H112 138 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 COMMD3Q9UBI1 195 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 METTL1Q9UBP6 276 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 LSM2Q9Y333 95 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 UBR1Q8IWV7 1749 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 DOCK1Q14185 1865 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 TECTAO75443 2155 aa0.6□□□□□ -2.31
SGIP1-208ENST00000468570 PHRF1Q9P1Y6 1649 aaKnown RBP0.6□□□□□ -2.31
SGIP1-208ENST00000468570 COL4A6Q14031 1691 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 PLXNA1Q9UIW2 1896 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 MON2Q7Z3U7 1717 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 ARAP2Q8WZ64 1704 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 TENM3Q9P273 2699 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 LAMC3Q9Y6N6 1575 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 PPIP5K1Q6PFW1 1433 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 CASKIN1Q8WXD9 1431 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 TRBV20-1A0A075B6N2 111 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 TRAV30A0A087WSZ9 112 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 JMJD7-PLA2G4BH0Y9G9 81 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 M0R129 80 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 M0R2P5 195 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 CDC42EP2O14613 210 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 TNFP01375 233 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 IFNA17P01571 189 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 HBDP02042 147 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 SAA1P0DJI8 122 aaPredicted RBP0.59□□□□□ -2.31
SGIP1-208ENST00000468570 SLC25A4P12235 298 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 TPT1P13693 172 aaKnown RBP0.59□□□□□ -2.31
SGIP1-208ENST00000468570 GNG4P50150 75 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 SPRNQ5BIV9 151 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 IZUMO2Q6UXV1 221 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 FOXI2Q6ZQN5 318 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 Q6ZS92 163 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 Q6ZUT4 128 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 ATOH7Q8N100 152 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 MMGT1Q8N4V1 131 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 TCTEX1D1Q8N7M0 179 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 OR5H6Q8NGV6 325 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 OR5AK2Q8NH90 309 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 CLEC2BQ92478 149 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 LSM10Q969L4 123 aaKnown RBP0.59□□□□□ -2.31
SGIP1-208ENST00000468570 NABP2Q9BQ15 211 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 SNHG12Q9BXW3 62 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 RPRMQ9NS64 109 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 GNG8Q9UK08 70 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 IER3IP1Q9Y5U9 82 aa0.59□□□□□ -2.31
SGIP1-208ENST00000468570 NCOA6Q14686 2063 aaPredicted RBP0.59□□□□□ -2.32
SGIP1-208ENST00000468570 MYH8P13535 1937 aa0.59□□□□□ -2.32
SGIP1-208ENST00000468570 FREM3P0C091 2139 aa0.59□□□□□ -2.32
SGIP1-208ENST00000468570 ARHGAP35Q9NRY4 1499 aa0.59□□□□□ -2.32
SGIP1-208ENST00000468570 TANC1Q9C0D5 1861 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 ERCC6L2Q5T890 1561 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 SIPA1L3O60292 1781 aaPredicted RBP0.58□□□□□ -2.32
SGIP1-208ENST00000468570 RGPD4Q7Z3J3 1758 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 RBBP6Q7Z6E9 1792 aaKnown RBP0.58□□□□□ -2.32
SGIP1-208ENST00000468570 ROS1P08922 2347 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 MUC4Q99102 2169 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 TRAV12-2A0A075B6T6 113 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 LOC107986453A0A1B0GWG9 222 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 PVALEFA0A1B0GWK0 134 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 C20orf202A1L168 122 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 MPC2O95563 127 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 PPYP01298 95 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 TRACP01848 142 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 HIST1H1DP16402 221 aaKnown RBP0.58□□□□□ -2.32
SGIP1-208ENST00000468570 GNG2P59768 71 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 KRTAP10-4P60372 401 aaPredicted RBP0.58□□□□□ -2.32
SGIP1-208ENST00000468570 PPP3R1P63098 170 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 SPATA45Q537H7 98 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 MEIG1Q5JSS6 88 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 NCMAPQ5T1S8 102 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 Q6AWC8 147 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 LINC00575Q6W349 94 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 CASC2Q6XLA1 102 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 ACBD7Q8N6N7 88 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 OTOSQ8NHW6 89 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 AP1S3Q96PC3 154 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 PDCD10Q9BUL8 212 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 AGPAT4-IT1Q9H0P7 198 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 RERGLQ9H628 205 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 FKBP11Q9NYL4 201 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 CCDC167Q9P0B6 97 aa0.58□□□□□ -2.32
SGIP1-208ENST00000468570 FLG2Q5D862 2391 aaPredicted RBP0.58□□□□□ -2.32
SGIP1-208ENST00000468570 PXDNQ92626 1479 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms