RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 F2Z2F3 143 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 RAB5AP20339 215 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 ATP5L2Q7Z4Y8 100 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 RNASE8Q8TDE3 154 aaKnown RBP7.76□□□□□ -1.17
MSX1-202ENST00000468421 GSN-AS1Q9NRJ2 163 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 MSRB1Q9NZV6 116 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 X6R8D5 127 aa7.76□□□□□ -1.17
MSX1-202ENST00000468421 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 UBE2CO00762 179 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 NXPH4O95158 308 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 NTF3P20783 257 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 CAMPP49913 170 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 HBBP68871 147 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 RIGQ13278 110 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 IL17DQ8TAD2 202 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 TMEM263Q8WUH6 116 aaKnown RBP7.75□□□□□ -1.17
MSX1-202ENST00000468421 BORCS7Q96B45 105 aa7.75□□□□□ -1.17
MSX1-202ENST00000468421 IGHV4-4A0A075B6R2 117 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 M0R381 172 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
MSX1-202ENST00000468421 CACNG7P62955 275 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 RRN3P1Q2M238 152 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 DMRTA1Q5VZB9 504 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 RNF183Q96D59 192 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 RCHY1Q96PM5 261 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 RETNQ9HD89 108 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 PHLDA3Q9Y5J5 127 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 NACAE9PAV3 2078 aa7.74□□□□□ -1.17
MSX1-202ENST00000468421 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 TWIST1Q15672 202 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 WDR73Q6P4I2 378 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 RASL11AQ6T310 242 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 Q6ZWC4 215 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 GATD1Q8NB37 220 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 C16orf74Q96GX8 76 aa7.73□□□□□ -1.17
MSX1-202ENST00000468421 RAB4BP61018 213 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 ZFP82Q8N141 532 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 OR11H2Q8NH07 326 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 OVOL2Q9BRP0 275 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 SPXQ9BT56 116 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 JPT2Q9H910 190 aa7.72□□□□□ -1.17
MSX1-202ENST00000468421 MRPL16Q9NX20 251 aaKnown RBP7.72□□□□□ -1.17
MSX1-202ENST00000468421 A0A1B0GW15 77 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 M0R2P5 195 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 PHOX2AO14813 284 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 HLA-DQA1P01909 254 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 TRGC2P03986 189 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 SLAQ13239 276 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 COX19Q49B96 90 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 DEFB121Q5J5C9 76 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 SBSPONQ8IVN8 264 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
MSX1-202ENST00000468421 IGHV4-28A0A0C4DH34 117 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 MT-ND6P03923 174 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 EVI2AP22794 236 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 FABP9Q0Z7S8 132 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 AMN1Q8IY45 258 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 Q8NAQ8 132 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 SYT8Q8NBV8 401 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 FRZBQ92765 325 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 TMEM191AQ9H0A3 160 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
MSX1-202ENST00000468421 NOP10Q9NPE3 64 aaKnown RBP7.7□□□□□ -1.18
MSX1-202ENST00000468421 TP53TG1Q9Y2A0 90 aa7.7□□□□□ -1.18
MSX1-202ENST00000468421 DEFB4AO15263 64 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 S100A8P05109 93 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 TRGC1P0CF51 173 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 EMP1P54849 157 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 DAZ2Q13117 558 aaKnown RBP7.69□□□□□ -1.18
MSX1-202ENST00000468421 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 Q6ZTI0 123 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
MSX1-202ENST00000468421 MRAPQ8TCY5 172 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 PTH2Q96A98 100 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 RNF185Q96GF1 192 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 SAMD10Q9BYL1 202 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 KIF25-AS1Q9Y6Z4 181 aa7.69□□□□□ -1.18
MSX1-202ENST00000468421 MGAM2Q2M2H8 2515 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 A0A087WWL8 130 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 TRGV1A0A0A0MS02 117 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 APCSP02743 223 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 MIFP14174 115 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 LINC00315P59091 139 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 MRPL51Q4U2R6 128 aaKnown RBP7.68□□□□□ -1.18
MSX1-202ENST00000468421 PIK3CD-AS1Q5SR53 167 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 POM121L12Q8N7R1 296 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 RASL10AQ92737 203 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 TM2D3Q9BRN9 247 aa7.68□□□□□ -1.18
MSX1-202ENST00000468421 NOTCH1P46531 2555 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 TGP01266 2768 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms