RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 DERL1Q9BUN8 251 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 RNF122Q9H9V4 155 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 SOX21Q9Y651 276 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 ANKRD11Q6UB99 2663 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 UTP20O75691 2785 aaKnown RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 GVINP1Q7Z2Y8 2422 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 ROS1P08922 2347 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PTPRQQ9UMZ3 2332 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGKV2-28A0A075B6P5 120 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGLV3-32A0A0A0MS00 114 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRAV13-1A0A0B4J241 112 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGKV1-9A0A0C4DH69 117 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGKV1-12A0A0C4DH73 117 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 A0A1B0GW64 132 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 M0R135 149 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 LYRM1O43325 122 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF73O43830 326 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 MRPS14O60783 128 aaKnown RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGKV1D-12P01611 117 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGKV2D-28P01615 120 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGHV3-7P01780 117 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 MT-ND4LP03901 98 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRGV3P03979 118 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PRB1P04280 392 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 FKBP2P26885 142 aaKnown RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF80P51504 273 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PPP3R1P63098 170 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PRB3Q04118 309 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR8G1Q15617 311 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PIGYQ3MUY2 71 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 OCIAD2Q56VL3 154 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR2T2Q6IF00 324 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 LYZL2Q7Z4W2 148 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZFP62Q8NB50 900 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 DEDD2Q8WXF8 326 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PSMG3Q9BT73 122 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 OTORQ9NRC9 128 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 FAIMQ9NVQ4 179 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF835Q9Y2P0 537 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 RP1L1Q8IWN7 2480 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PKDREJQ9NTG1 2253 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 SMG1Q96Q15 3661 aaKnown RBP2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 PLXNB1O43157 2135 aa2.29□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGF2RP11717 2491 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRBV24-1A0A075B6N3 115 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGHV3-73A0A0B4J1V6 119 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 A0A0B4J2C4 111 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 TMEM212A6NML5 194 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 IFITM5A6NNB3 132 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 A8MWP6 167 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 CORTO00230 105 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 PDCD5O14737 125 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 LEPROTO15243 131 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 SNAPC5O75971 98 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGF2P01344 180 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 CD3DP04234 171 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 AKAIN1P0CW23 69 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGHV3-30-3P0DP02 117 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 AZU1P20160 251 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF93P35789 620 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 RBM11P57052 281 aaKnown RBP2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 FXYD4P59646 89 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 HBBP68871 147 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF181Q2M3W8 571 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 AMMECR1LQ6DCA0 310 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF826PQ6ZT77 177 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 C6orf201Q7Z4U5 140 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 HIST3H2BBQ8N257 126 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 TOMM5Q8N4H5 51 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 C14orf144Q96I85 54 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 ARHGAP5-AS1Q96IT6 56 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 CARD19Q96LW7 228 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 HIST1H2BLQ99880 126 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 SPANXDQ9BXN6 97 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 TMEM133Q9H2Q1 129 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 NIT2Q9NQR4 276 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 CBLN4Q9NTU7 201 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 ASF1BQ9NVP2 202 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 COA4Q9NYJ1 87 aa2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 HRNRQ86YZ3 2850 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P25-201ENST00000468402 NBASA2RRP1 2371 aa2.28□□□□□ -2.05
HMGB1P25-201ENST00000468402 PLCE1Q9P212 2302 aa2.28□□□□□ -2.05
HMGB1P25-201ENST00000468402 TRAV1-2A0A0B4J238 106 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 TRAV17A0A0B4J275 112 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 ODAMA1E959 279 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 C9orf170A2RU37 121 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 LYNX1G3V0Z9 82 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 H7BYZ3 331 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 M0R378 163 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 GEMIN2O14893 280 aaKnown RBP2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGKV1D-33P01593 117 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms