RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 HIGD1AQ9Y241 93 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 SNURFLB1AK76 121 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 H3BRN7 92 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
CXCR4-203ENST00000466288 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
CXCR4-203ENST00000466288 AKR1C3P42330 323 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 UBE2L3P68036 154 aaKnown RBP9.79□□□□□ -0.84
CXCR4-203ENST00000466288 DAZ2Q13117 558 aaKnown RBP9.79□□□□□ -0.84
CXCR4-203ENST00000466288 ADIRFQ15847 76 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 Q6ZTI0 123 aa9.79□□□□□ -0.84
CXCR4-203ENST00000466288 ELOBQ15370 118 aa9.78□□□□□ -0.84
CXCR4-203ENST00000466288 GFI1BQ5VTD9 330 aa9.78□□□□□ -0.84
CXCR4-203ENST00000466288 LINC01551Q86U37 167 aa9.78□□□□□ -0.84
CXCR4-203ENST00000466288 SMIM12Q96EX1 92 aa9.78□□□□□ -0.84
CXCR4-203ENST00000466288 A0A087X0K7 114 aa9.77□□□□□ -0.85
CXCR4-203ENST00000466288 RPL7P18124 248 aaKnown RBP9.77□□□□□ -0.85
CXCR4-203ENST00000466288 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
CXCR4-203ENST00000466288 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.85
CXCR4-203ENST00000466288 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 KCNIP4Q6PIL6 250 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 ISOC2Q96AB3 205 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 PYGO2Q9BRQ0 406 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 BIN3Q9NQY0 253 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 FAM30AQ9NZY2 134 aa9.76□□□□□ -0.85
CXCR4-203ENST00000466288 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
CXCR4-203ENST00000466288 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
CXCR4-203ENST00000466288 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
CXCR4-203ENST00000466288 SUMO1P63165 101 aaKnown RBP9.75□□□□□ -0.85
CXCR4-203ENST00000466288 LYPD5Q6UWN5 251 aa9.75□□□□□ -0.85
CXCR4-203ENST00000466288 MSRB1Q9NZV6 116 aa9.75□□□□□ -0.85
CXCR4-203ENST00000466288 ICOSQ9Y6W8 199 aa9.75□□□□□ -0.85
CXCR4-203ENST00000466288 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
CXCR4-203ENST00000466288 IGLV5-52A0A0A0MRZ9 124 aa9.74□□□□□ -0.85
CXCR4-203ENST00000466288 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
CXCR4-203ENST00000466288 OR10J4P0C629 311 aa9.74□□□□□ -0.85
CXCR4-203ENST00000466288 RPL35P42766 123 aaKnown RBP9.74□□□□□ -0.85
CXCR4-203ENST00000466288 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
CXCR4-203ENST00000466288 BPIFA4PQ86YQ2 179 aa9.74□□□□□ -0.85
CXCR4-203ENST00000466288 GGTLC3B5MD39 225 aa9.73□□□□□ -0.85
CXCR4-203ENST00000466288 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
CXCR4-203ENST00000466288 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
CXCR4-203ENST00000466288 GNG4P50150 75 aa9.73□□□□□ -0.85
CXCR4-203ENST00000466288 DEFB104AQ8WTQ1 72 aa9.73□□□□□ -0.85
CXCR4-203ENST00000466288 SFRP2Q96HF1 295 aa9.73□□□□□ -0.85
CXCR4-203ENST00000466288 LINC00467Q9BRT7 94 aa9.73□□□□□ -0.85
CXCR4-203ENST00000466288 TRAV5A0A0B4J249 113 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 LRCOL1A6NCL2 159 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 PRAC2D3DTV9 90 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 NPIPB6E9PJ23 425 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 PAX4O43316 350 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 PLA2G1BP04054 148 aaKnown RBP9.72□□□□□ -0.85
CXCR4-203ENST00000466288 PDE6HQ13956 83 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 MORN5Q5VZ52 161 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 C5orf17Q8NAS9 161 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 NTN5Q8WTR8 489 aaPredicted RBP9.72□□□□□ -0.85
CXCR4-203ENST00000466288 KLF12Q9Y4X4 402 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 K7EP13 123 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 TYMSP04818 313 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 RPS10P46783 165 aaKnown RBP9.72□□□□□ -0.85
CXCR4-203ENST00000466288 OR10G8Q8NGN5 311 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 OCC1Q8TAD7 63 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 DERL1Q9BUN8 251 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 ZNF331Q9NQX6 463 aaPredicted RBP9.72□□□□□ -0.85
CXCR4-203ENST00000466288 OTORQ9NRC9 128 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 GSN-AS1Q9NRJ2 163 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 OSTCQ9NRP0 149 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 EPDR1Q9UM22 224 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
CXCR4-203ENST00000466288 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 TRGV1A0A0A0MS02 117 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 J3KRW8 73 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 PEX7O00628 323 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 GCGP01275 180 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 S100A6P06703 90 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 PYYP10082 97 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 TMEM183BQ1AE95 376 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 WFDC10BQ8IUB3 73 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.86
CXCR4-203ENST00000466288 RNF213Q63HN8 5207 aa9.7□□□□□ -0.86
CXCR4-203ENST00000466288 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
CXCR4-203ENST00000466288 FBLL1A6NHQ2 334 aaKnown RBP9.7□□□□□ -0.86
CXCR4-203ENST00000466288 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
CXCR4-203ENST00000466288 FMC1Q96HJ9 113 aa9.7□□□□□ -0.86
CXCR4-203ENST00000466288 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
CXCR4-203ENST00000466288 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
CXCR4-203ENST00000466288 SPINK4O60575 86 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 ZNF253O75346 499 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 SNRPCP09234 159 aaKnown RBP9.69□□□□□ -0.86
CXCR4-203ENST00000466288 CXCL1P09341 107 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 EVI2AP22794 236 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 CRYBA4P53673 196 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 COX19Q49B96 90 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 CENPWQ5EE01 88 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms