RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.77
HDAC6-215ENST00000465457 TMSB15BA0A087X1C1 80 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 LOC102724200A0A096LPH7 203 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-215ENST00000465457 KLLNB2CW77 178 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 PRB4P10163 310 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-215ENST00000465457 CACNG7P62955 275 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 HIST1H2BLQ99880 126 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 FAM110AQ9BQ89 295 aa10.2□□□□□ -0.78
HDAC6-215ENST00000465457 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 IFITM10A6NMD0 228 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 OR5AL1P0C617 328 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 FABP4P15090 132 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 TFPI2P48307 235 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 GFI1BQ5VTD9 330 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 SPATA25Q9BR10 227 aa10.19□□□□□ -0.78
HDAC6-215ENST00000465457 ALKBH7Q9BT30 221 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-215ENST00000465457 IGKV3D-20A0A0C4DH25 116 aa10.18□□□□□ -0.78
HDAC6-215ENST00000465457 ZNF705DP0CH99 300 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-215ENST00000465457 ZNF705BP0CI00 300 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-215ENST00000465457 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-215ENST00000465457 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
HDAC6-215ENST00000465457 DNLZQ5SXM8 178 aa10.18□□□□□ -0.78
HDAC6-215ENST00000465457 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
HDAC6-215ENST00000465457 KCNS1Q96KK3 526 aa10.18□□□□□ -0.78
HDAC6-215ENST00000465457 SSBP4Q9BWG4 385 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-215ENST00000465457 F6UB75 175 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 SNAI2O43623 268 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 AMBPP02760 352 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 ASIPP42127 132 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 KIAA1644Q3SXP7 199 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 PDZD11Q5EBL8 140 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 SMIM15Q7Z3B0 74 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 TMEM61Q8N0U2 210 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 OR10D4PQ8NGN7 298 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 C18orf32Q8TCD1 76 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
HDAC6-215ENST00000465457 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 C7orf71A4D174 169 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 A8MTW9 85 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 SERF1AO75920 110 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 LY6G6CO95867 125 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 RNASE4P34096 147 aaKnown RBP10.16□□□□□ -0.78
HDAC6-215ENST00000465457 TWIST1Q15672 202 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 PRR9Q5T870 116 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 CLUHP3Q96NS8 147 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 C12orf57Q99622 126 aa10.16□□□□□ -0.78
HDAC6-215ENST00000465457 VPS13DQ5THJ4 4388 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 PPBPP02775 128 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 CDKN1BP46527 198 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 FAM104BQ5XKR9 115 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 TMEM256Q8N2U0 113 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 C11orf21Q9P2W6 132 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
HDAC6-215ENST00000465457 A8MZ25 164 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 NTF3P20783 257 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 S100A4P26447 101 aaKnown RBP10.14□□□□□ -0.79
HDAC6-215ENST00000465457 TDRG1Q3Y452 100 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 CD300EQ496F6 205 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-215ENST00000465457 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 CHCHD1Q96BP2 118 aaKnown RBP10.14□□□□□ -0.79
HDAC6-215ENST00000465457 SAMD10Q9BYL1 202 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
HDAC6-215ENST00000465457 PMCHP20382 165 aa10.13□□□□□ -0.79
HDAC6-215ENST00000465457 DEFB1P60022 68 aa10.13□□□□□ -0.79
HDAC6-215ENST00000465457 SPANXN1Q5VSR9 72 aa10.13□□□□□ -0.79
HDAC6-215ENST00000465457 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
HDAC6-215ENST00000465457 SELENOKQ9Y6D0 94 aa10.13□□□□□ -0.79
HDAC6-215ENST00000465457 ZNF324O75467 553 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-215ENST00000465457 RAB4AP20338 218 aa10.12□□□□□ -0.79
HDAC6-215ENST00000465457 LINC00310P59036 64 aa10.12□□□□□ -0.79
HDAC6-215ENST00000465457 DEFB131AP59861 70 aa10.12□□□□□ -0.79
HDAC6-215ENST00000465457 ANXA2RQ3ZCQ2 193 aa10.12□□□□□ -0.79
HDAC6-215ENST00000465457 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
HDAC6-215ENST00000465457 MUC4Q99102 2169 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 H3BMM0 161 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 H3BVH4 76 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 J3KRW8 73 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 HSBP1O75506 76 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-215ENST00000465457 AMTNQ6UX39 209 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 C20orf144Q9BQM9 153 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 SCRT2Q9NQ03 307 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
HDAC6-215ENST00000465457 NXPH4O95158 308 aa10.1□□□□□ -0.79
HDAC6-215ENST00000465457 AMTP48728 403 aa10.1□□□□□ -0.79
HDAC6-215ENST00000465457 AMN1Q8IY45 258 aa10.1□□□□□ -0.79
HDAC6-215ENST00000465457 OR10AG1Q8NH19 301 aa10.1□□□□□ -0.79
HDAC6-215ENST00000465457 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
HDAC6-215ENST00000465457 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
HDAC6-215ENST00000465457 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
HDAC6-215ENST00000465457 IGHV1OR15-1A0A075B7D0 117 aa10.09□□□□□ -0.79
HDAC6-215ENST00000465457 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
HDAC6-215ENST00000465457 IGLV1-51P01701 117 aa10.09□□□□□ -0.79
HDAC6-215ENST00000465457 CKS2P33552 79 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms