RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	COLCA2	A8K830	154 aa		5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	DEFB4A	O15263	64 aa		5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	CRX	O43186	299 aa	Predicted RBP	5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	ZNF324	O75467	553 aa	Predicted RBP	5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	RPS20	P60866	119 aa	Known RBP	5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	ELOB	Q15370	118 aa		5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	MUC21	Q5SSG8	566 aa		5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	C11orf45	Q8TAV5	145 aa		5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	NEU1	Q99519	415 aa		5.55	□□□□□ -1.52
ITSN1-223	ENST00000465143	IGHV3OR16-12	A0A075B7B8	117 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143		A0A1W2PPQ1	181 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	GRIFIN	A4D1Z8	144 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	AMBP	P02760	352 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	CXCL1	P09341	107 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	GIG44	P09565	113 aa	Predicted RBP	5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	MIF	P14174	115 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	ANXA2R	Q3ZCQ2	193 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	ZNF575	Q86XF7	245 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	GTSF1	Q8WW33	167 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	PGLYRP4	Q96LB8	373 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	TPPP3	Q9BW30	176 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	GFRA4	Q9GZZ7	299 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	NAT8B	Q9UHF3	227 aa		5.54	□□□□□ -1.52
ITSN1-223	ENST00000465143	TENM3	Q9P273	2699 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	IGHV4-28	A0A0C4DH34	117 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	FAM231B	A6NCW3	169 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	NUPR2	A6NF83	97 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	HIGD1C	A8MV81	97 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	GNRH2	O43555	120 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	SPINK4	O60575	86 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	INS	P01308	110 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	RBMY1A1	P0DJD3	496 aa	Known RBP	5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	RBMY1C	P0DJD4	496 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	NANOS2	P60321	138 aa	Known RBP	5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	RBMY1F	Q15415	496 aa	Known RBP	5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	FAM159A	Q6UWV7	190 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	NUP35	Q8NFH5	326 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	BTF3L4	Q96K17	158 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	FAM210B	Q96KR6	192 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	PYGO2	Q9BRQ0	406 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	TMEM208	Q9BTX3	173 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	C11orf68	Q9H3H3	251 aa	Known RBP	5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	KLK5	Q9Y337	293 aa	Predicted RBP	5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	GOLT1B	Q9Y3E0	138 aa		5.53	□□□□□ -1.52
ITSN1-223	ENST00000465143	TRBV24-1	A0A075B6N3	115 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	TRAV9-1	A0A075B6T8	112 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	IGHV1OR15-1	A0A075B7D0	117 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	TYMS	P04818	313 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	IGLC6	P0CF74	106 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	ASIP	P42127	132 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	EMP1	P54849	157 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	FOXA3	P55318	350 aa	Predicted RBP	5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	MRPL54	Q6P161	138 aa	Known RBP	5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	LYZL1	Q6UWQ5	148 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	FER1L6-AS1	Q8NA97	138 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143		Q8NAQ8	132 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	CSNK1G2-AS1	Q8NCQ2	148 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	KCNS1	Q96KK3	526 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	LINC01587	Q99440	93 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	C20orf144	Q9BQM9	153 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	TP53TG3	Q9ULZ0	132 aa		5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	TMA7	Q9Y2S6	64 aa	Known RBP	5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.52	□□□□□ -1.53
ITSN1-223	ENST00000465143	MUC21	A0A0G2JKD1	596 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	MUC21	A0A140T8X8	626 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	LCE6A	A0A183	80 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	CBY3	A6NI87	242 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143		H3BVH4	76 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	PRM2	P04554	102 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	HTN1	P15515	57 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	RAB5A	P20339	215 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	S100A4	P26447	101 aa	Known RBP	5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	CTRL	P40313	264 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	SST	P61278	116 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	TDRG1	Q3Y452	100 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	C1orf158	Q8N1D5	194 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	TMEM256	Q8N2U0	113 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	BORCS7	Q96B45	105 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143		X6R8D5	127 aa		5.51	□□□□□ -1.53
ITSN1-223	ENST00000465143	TRGV11	A0A075B6L2	103 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	IGHV3-16	A0A0C4DH30	117 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143		A0A1B0GUT8	65 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	SMIM9	A6NGZ8	99 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143		F2Z2F3	143 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	SNAI2	O43623	268 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	OR5AL1	P0C617	328 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	ARMS2	P0C7Q2	107 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	RNASE3	P12724	160 aa	Known RBP	5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	RPS10	P46783	165 aa	Known RBP	5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	RIG	Q13278	110 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	DNLZ	Q5SXM8	178 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	LINC00467	Q9BRT7	94 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143	MDFIC	Q9P1T7	246 aa		5.5	□□□□□ -1.53
ITSN1-223	ENST00000465143		A0A1B0GXF2	115 aa		5.49	□□□□□ -1.53
ITSN1-223	ENST00000465143	SPART-AS1	P0CW21	52 aa		5.49	□□□□□ -1.53
ITSN1-223	ENST00000465143	MED14OS	P0DP75	135 aa		5.49	□□□□□ -1.53
ITSN1-223	ENST00000465143	AZU1	P20160	251 aa		5.49	□□□□□ -1.53
ITSN1-223	ENST00000465143	RAB4B	P61018	213 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms