RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 TCRAP04437 139 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 CD7P09564 240 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 CCL1P22362 96 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 CAV3P56539 151 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 CCL8P80075 99 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 DEFB134Q4QY38 66 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 TMEM170BQ5T4T1 132 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 C12orf73Q69YU5 71 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 LGALS9CQ6DKI2 356 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 NOXRED1Q6NXP6 359 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 SLC22A24Q8N4F4 322 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 LINC00311Q8N616 119 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 WFDC11Q8NEX6 87 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 CLDND2Q8NHS1 167 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 TSKUQ8WUA8 353 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 CCL17Q92583 94 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 TXNDC17Q9BRA2 123 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF286AQ9HBT8 521 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 RBM12B-AS1Q9P1G2 102 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 GNG13Q9P2W3 67 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 ANAPC10Q9UM13 185 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF706Q9Y5V0 76 aaPredicted RBP1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 MCM3APO60318 1980 aa1.84□□□□□ -2.11
HMGXB4-205ENST00000464480 RGPD3A6NKT7 1758 aaPredicted RBP1.84□□□□□ -2.12
HMGXB4-205ENST00000464480 MED1Q15648 1581 aaPredicted RBP1.84□□□□□ -2.12
HMGXB4-205ENST00000464480 TSC2P49815 1807 aa1.84□□□□□ -2.12
HMGXB4-205ENST00000464480 LAMB2P55268 1798 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 ITGB4P16144 1822 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 LAMA4Q16363 1823 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 SLX4Q8IY92 1834 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 IGHV3-43A0A0B4J1X8 118 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 TRBV27A0A0K0K1C4 114 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 C4orf51C9J302 202 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 C8orf87E5RJ46 101 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 H3BP45 60 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 EPPINO95925 133 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 CXCL8P10145 99 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 HRES1P13985 223 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 COL8A2P25067 703 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 SSR2P43308 183 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 PCBD1P61457 104 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 C2orf91Q6ZV80 131 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 VN1R4Q7Z5H5 301 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 SBSPONQ8IVN8 264 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 SERP2Q8N6R1 65 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 TOMM6Q96B49 74 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 CHCHD1Q96BP2 118 aaKnown RBP1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 TRGV9Q99603 122 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 C11orf68Q9H3H3 251 aaKnown RBP1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 NXT2Q9NPJ8 142 aaKnown RBP1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 LINC00527Q9UJ94 153 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 R4GN34 69 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 SCN10AQ9Y5Y9 1956 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 TJP1Q07157 1748 aa1.83□□□□□ -2.12
HMGXB4-205ENST00000464480 COL14A1Q05707 1796 aaKnown RBP1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 KIDINS220Q9ULH0 1771 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 PLXNA4Q9HCM2 1894 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 TICRRQ7Z2Z1 1910 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 PAPPAQ13219 1627 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 TRBV20OR9-2A0A075B6H5 130 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 TRAV8-3A0A0A6YYJ7 113 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 IGHV3-21A0A0B4J1V1 117 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 TRAV17A0A0B4J275 112 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 A0A1B0GXF2 115 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 A0A1W2PNN7 141 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 hADV29S1A0JD25 119 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 F2Z2F3 143 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 FFAR1O14842 300 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 NDUFC1O43677 76 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 NUPR1O60356 82 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 LEPROTL1O95214 131 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 TCL1BO95988 128 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 ASAH2BP0C7U1 165 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 S100A4P26447 101 aaKnown RBP1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 INSL3P51460 131 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 RPL30P62888 115 aaKnown RBP1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 UBE2BP63146 152 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 HBBP68871 147 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 TMEM155Q4W5P6 130 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 NCBP2-AS2Q69YL0 99 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 LINC00643Q86TS7 51 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 OR5C1Q8NGR4 320 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 H1FXQ92522 213 aaKnown RBP1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 FXYD5Q96DB9 178 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 ABHD14BQ96IU4 210 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 LINC01600Q96MT4 127 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 DSCR8Q96T75 97 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 DPH3P1Q9H4G8 78 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 IL36BQ9NZH7 164 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 ICOSQ9Y6W8 199 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 ARFGEF2Q9Y6D5 1785 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 KIAA1671Q9BY89 1806 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 KMT2EQ8IZD2 1858 aa1.82□□□□□ -2.12
HMGXB4-205ENST00000464480 THADAQ6YHU6 1953 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 DYSFO75923 2080 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 DDX60Q8IY21 1712 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms