RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 COA4Q9NYJ1 87 aa0.05□□□□□ -2.4
USP9X-204ENST00000463829 PLXNA2O75051 1894 aa0.04□□□□□ -2.4
USP9X-204ENST00000463829 TAS2R8Q9NYW2 309 aa0.04□□□□□ -2.4
USP9X-204ENST00000463829 CALML5Q9NZT1 146 aa0.04□□□□□ -2.4
USP9X-204ENST00000463829 NDUFAF1Q9Y375 327 aa0.04□□□□□ -2.4
USP9X-204ENST00000463829 IGSF10Q6WRI0 2623 aa0.04□□□□□ -2.4
USP9X-204ENST00000463829 TRAV12-2A0A075B6T6 113 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 C9JAW5 83 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 PAEPP09466 180 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 PYYP10082 97 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 AKR1D1P51857 326 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 TMEM91Q6ZNR0 172 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 TMEM141Q96I45 108 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 HSPB11Q9Y547 144 aa0.03□□□□□ -2.4
USP9X-204ENST00000463829 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.4
USP9X-204ENST00000463829 TRAV36DV7A0A075B6V5 113 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 TRAV2A0A0B4J234 112 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 CXorf51AA0A1B0GTR3 108 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 SLC25A26Q70HW3 274 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 BET1LQ9NYM9 111 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 GINS2Q9Y248 185 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 F5P12259 2224 aa0.02□□□□□ -2.41
USP9X-204ENST00000463829 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
USP9X-204ENST00000463829 A0A1B0GX51 115 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 SMIM24O75264 130 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 MT-ND4LP03901 98 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 PRR15LQ9BU68 103 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 CCDC171Q6TFL3 1326 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 OTOGQ6ZRI0 2925 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 TNS1Q9HBL0 1735 aaKnown RBP0.01□□□□□ -2.41
USP9X-204ENST00000463829 ASXL3Q9C0F0 2248 aa0.01□□□□□ -2.41
USP9X-204ENST00000463829 A0A1B0GW64 132 aa0□□□□□ -2.41
USP9X-204ENST00000463829 F2Z2F3 143 aa0□□□□□ -2.41
USP9X-204ENST00000463829 ZNF670-ZNF695F2Z2N8 137 aa0□□□□□ -2.41
USP9X-204ENST00000463829 POLQO75417 2590 aa0□□□□□ -2.41
USP9X-204ENST00000463829 SPINK1P00995 79 aa0□□□□□ -2.41
USP9X-204ENST00000463829 HLA-DRB4P13762 266 aa0□□□□□ -2.41
USP9X-204ENST00000463829 OR8B8Q15620 311 aa0□□□□□ -2.41
USP9X-204ENST00000463829 Q5BKY6 102 aa0□□□□□ -2.41
USP9X-204ENST00000463829 TMEM244Q5VVB8 128 aa0□□□□□ -2.41
USP9X-204ENST00000463829 BANF2Q9H503 90 aa0□□□□□ -2.41
USP9X-204ENST00000463829 DNAJC15Q9Y5T4 150 aa0□□□□□ -2.41
USP9X-204ENST00000463829 HLA-DRB4X5D2U9 266 aa0□□□□□ -2.41
USP9X-204ENST00000463829 F8P00451 2351 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 ZNF142P52746 1687 aaPredicted RBP-0.01□□□□□ -2.41
USP9X-204ENST00000463829 DEGS1O15121 323 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 TNFSF15O95150 251 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 TFF1P04155 84 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 SCTP09683 121 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 EMX2Q04743 252 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 MAGOHBQ96A72 148 aaKnown RBP-0.01□□□□□ -2.41
USP9X-204ENST00000463829 SPANXCQ9NY87 97 aa-0.01□□□□□ -2.41
USP9X-204ENST00000463829 HRNRQ86YZ3 2850 aaPredicted RBP-0.01□□□□□ -2.41
USP9X-204ENST00000463829 LAMC3Q9Y6N6 1575 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 UHRF1BP1LA0JNW5 1464 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 GNG14A0A1W2PPG7 69 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 RBP4P02753 201 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 NBEAP1P0C6P0 100 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 CMPK1P30085 196 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 ELOF1P60002 83 aaKnown RBP-0.02□□□□□ -2.41
USP9X-204ENST00000463829 NDUFA11Q86Y39 141 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 SNX29P2Q8IUI4 249 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 TCTE3Q8IZS6 198 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 DYNLRB2Q8TF09 96 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 SPANXA1Q9NS26 97 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 HIGD1AQ9Y241 93 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 MUC12Q9UKN1 5478 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 CASZ1Q86V15 1759 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 CADP27708 2225 aa-0.02□□□□□ -2.41
USP9X-204ENST00000463829 STAB1Q9NY15 2570 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 BORCS7-ASMTA0A0B4J1R7 106 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 TCRBV3S1A0A5B6 114 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 H0YJX3 145 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 YPEL1O60688 119 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 OR2T2Q6IF00 324 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 ATP6V0E2Q8NHE4 81 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 BPESC1Q9GZL8 116 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 NOP16Q9Y3C1 178 aaKnown RBP-0.03□□□□□ -2.41
USP9X-204ENST00000463829 UNC13BO14795 1591 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 CDK13Q14004 1512 aaKnown RBP-0.03□□□□□ -2.41
USP9X-204ENST00000463829 MUC2Q02817 5179 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 ARAP1Q96P48 1450 aa-0.03□□□□□ -2.41
USP9X-204ENST00000463829 VIRMAQ69YN4 1812 aaKnown RBP-0.03□□□□□ -2.42
USP9X-204ENST00000463829 SOGA1O94964 1423 aa-0.04□□□□□ -2.42
USP9X-204ENST00000463829 RBAKDNA6NC62 111 aa-0.04□□□□□ -2.42
USP9X-204ENST00000463829 SLC25A6P12236 298 aa-0.04□□□□□ -2.42
USP9X-204ENST00000463829 CACNA1CQ13936 2221 aa-0.04□□□□□ -2.42
USP9X-204ENST00000463829 KIF13AQ9H1H9 1805 aa-0.04□□□□□ -2.42
USP9X-204ENST00000463829 KMT2CQ8NEZ4 4911 aaKnown RBP-0.04□□□□□ -2.42
USP9X-204ENST00000463829 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.05□□□□□ -2.42
USP9X-204ENST00000463829 COX6A2Q02221 97 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 CCDC153Q494R4 210 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 CLLU1Q5K131 121 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 ATP11AUNQ6ZP68 121 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 CYP2G1PQ6ZSU1 146 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 ERG28Q9UKR5 140 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 PLXNA1Q9UIW2 1896 aa-0.05□□□□□ -2.42
USP9X-204ENST00000463829 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
USP9X-204ENST00000463829 GVQW2A0A096LPI5 108 aaPredicted RBP-0.06□□□□□ -2.42
USP9X-204ENST00000463829 CCDC179H3BU77 68 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms