RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 DAZ2Q13117 558 aaKnown RBP10.29□□□□□ -0.76
COL6A1-202ENST00000463060 WDR73Q6P4I2 378 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 FER1L6-AS1Q8NA97 138 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 YPEL4Q96NS1 127 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 SPATA25Q9BR10 227 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 SPXQ9BT56 116 aa10.29□□□□□ -0.76
COL6A1-202ENST00000463060 IGHV4-4A0A075B6R2 117 aa10.28□□□□□ -0.76
COL6A1-202ENST00000463060 IGHV4-28A0A0C4DH34 117 aa10.28□□□□□ -0.76
COL6A1-202ENST00000463060 F2Z2F3 143 aa10.28□□□□□ -0.76
COL6A1-202ENST00000463060 H3BVH4 76 aa10.28□□□□□ -0.76
COL6A1-202ENST00000463060 FAM3BP58499 235 aaPredicted RBP10.28□□□□□ -0.76
COL6A1-202ENST00000463060 ZNF415Q09FC8 603 aa10.28□□□□□ -0.76
COL6A1-202ENST00000463060 NXPH4O95158 308 aa10.27□□□□□ -0.77
COL6A1-202ENST00000463060 S100A4P26447 101 aaKnown RBP10.27□□□□□ -0.77
COL6A1-202ENST00000463060 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
COL6A1-202ENST00000463060 NAT8BQ9UHF3 227 aa10.27□□□□□ -0.77
COL6A1-202ENST00000463060 COL7A1Q02388 2944 aa10.27□□□□□ -0.77
COL6A1-202ENST00000463060 SPINK4O60575 86 aa10.26□□□□□ -0.77
COL6A1-202ENST00000463060 OR10AG1Q8NH19 301 aa10.26□□□□□ -0.77
COL6A1-202ENST00000463060 RASL10AQ92737 203 aa10.26□□□□□ -0.77
COL6A1-202ENST00000463060 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
COL6A1-202ENST00000463060 TRAV9-1A0A075B6T8 112 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 M0R2P5 195 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 SCO1O75880 301 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
COL6A1-202ENST00000463060 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 CBLN2Q8IUK8 224 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
COL6A1-202ENST00000463060 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
COL6A1-202ENST00000463060 SMCO4Q9NRQ5 59 aa10.25□□□□□ -0.77
COL6A1-202ENST00000463060 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 A0A1B0GUT8 65 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 SNURFLB1AK76 121 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 NTF3P20783 257 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 CACNG7P62955 275 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 ELOBQ15370 118 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 LGALS9BQ3B8N2 356 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 TMEM88Q6PEY1 159 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 TPPP3Q9BW30 176 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
COL6A1-202ENST00000463060 DEFB4AO15263 64 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 KCNIP4Q6PIL6 250 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 BTF3L4Q96K17 158 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 NDUFAF3Q9BU61 184 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 DKK2Q9UBU2 259 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 URGCP-MRPS24S4R325 110 aa10.23□□□□□ -0.77
COL6A1-202ENST00000463060 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
COL6A1-202ENST00000463060 LYRM9A8MSI8 78 aa10.22□□□□□ -0.77
COL6A1-202ENST00000463060 S100PP25815 95 aa10.22□□□□□ -0.77
COL6A1-202ENST00000463060 Q6ZTI0 123 aa10.22□□□□□ -0.77
COL6A1-202ENST00000463060 ZFP82Q8N141 532 aa10.22□□□□□ -0.77
COL6A1-202ENST00000463060 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
COL6A1-202ENST00000463060 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
COL6A1-202ENST00000463060 EMP1P54849 157 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 ATP5L2Q7Z4Y8 100 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 POM121L12Q8N7R1 296 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 C18orf15Q96N68 181 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 JPT2Q9H910 190 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 CELA1Q9UNI1 258 aa10.21□□□□□ -0.77
COL6A1-202ENST00000463060 A0A1B0GW15 77 aa10.2□□□□□ -0.78
COL6A1-202ENST00000463060 M0R381 172 aa10.2□□□□□ -0.78
COL6A1-202ENST00000463060 CRYGDP07320 174 aa10.2□□□□□ -0.78
COL6A1-202ENST00000463060 RIGQ13278 110 aa10.2□□□□□ -0.78
COL6A1-202ENST00000463060 UFSP1Q6NVU6 142 aa10.2□□□□□ -0.78
COL6A1-202ENST00000463060 MRPL54Q6P161 138 aaKnown RBP10.2□□□□□ -0.78
COL6A1-202ENST00000463060 SYT8Q8NBV8 401 aa10.2□□□□□ -0.78
COL6A1-202ENST00000463060 TGP01266 2768 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 TRGV1A0A0A0MS02 117 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 TGIF2-C20orf24A0A0A6YYL0 155 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 A0A0J9YWU9 116 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 COLCA2A8K830 154 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 RS1O15537 224 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 LINC00315P59091 139 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 SSTP61278 116 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 TWIST1Q15672 202 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 RASL11AQ6T310 242 aa10.19□□□□□ -0.78
COL6A1-202ENST00000463060 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 GAGE7O76087 117 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 EVI2AP22794 236 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 HBBP68871 147 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 BORCS7Q96B45 105 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms