RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 E9PLD3 99 aa9.49□□□□□ -0.89
HDAC4-208ENST00000463007 GNRH2O43555 120 aa9.49□□□□□ -0.89
HDAC4-208ENST00000463007 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
HDAC4-208ENST00000463007 NRACQ8N912 160 aa9.49□□□□□ -0.89
HDAC4-208ENST00000463007 PLEKHB2Q96CS7 222 aa9.49□□□□□ -0.89
HDAC4-208ENST00000463007 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 SONP18583 2426 aaKnown RBP9.48□□□□□ -0.89
HDAC4-208ENST00000463007 A0A087WX48 190 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 LMO4P61968 165 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 ZMAT4Q9H898 229 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 A0A1B0GV72 72 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 C19orf84I3L1E1 186 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
HDAC4-208ENST00000463007 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 CCDC144NLQ6NUI1 221 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 METTL26Q96S19 204 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 JPT2Q9H910 190 aa9.48□□□□□ -0.89
HDAC4-208ENST00000463007 UTP20O75691 2785 aaKnown RBP9.48□□□□□ -0.89
HDAC4-208ENST00000463007 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 Q8N9W7 124 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 TM2D2Q9BX73 214 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 MUC4Q99102 2169 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 ABCA2Q9BZC7 2435 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 A0A087WWL8 130 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 SYT8Q8NBV8 401 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
HDAC4-208ENST00000463007 H7C1H1 209 aa9.46□□□□□ -0.89
HDAC4-208ENST00000463007 SCGB1C2P0DMR2 95 aa9.46□□□□□ -0.89
HDAC4-208ENST00000463007 RRN3P1Q2M238 152 aa9.46□□□□□ -0.89
HDAC4-208ENST00000463007 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.89
HDAC4-208ENST00000463007 SMIM2Q9BVW6 85 aa9.46□□□□□ -0.89
HDAC4-208ENST00000463007 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 F8VRH5 84 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 LY6EQ16553 131 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 PSMG3-AS1Q96PY0 264 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 FAM208BQ5VWN6 2430 aa9.46□□□□□ -0.9
HDAC4-208ENST00000463007 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 F8W1H4 67 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
HDAC4-208ENST00000463007 SAA4P35542 130 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 RAB9AP51151 201 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 UBE2E1P51965 193 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 SUMO2P61956 95 aaKnown RBP9.45□□□□□ -0.9
HDAC4-208ENST00000463007 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
HDAC4-208ENST00000463007 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 CLPSL1A2RUU4 121 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 BRD3OSQ6XYD6 125 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 CKS1BP61024 79 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 SMPXQ9UHP9 88 aa9.45□□□□□ -0.9
HDAC4-208ENST00000463007 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
HDAC4-208ENST00000463007 PLNP26678 52 aa9.44□□□□□ -0.9
HDAC4-208ENST00000463007 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
HDAC4-208ENST00000463007 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
HDAC4-208ENST00000463007 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
HDAC4-208ENST00000463007 HTN1P15515 57 aa9.44□□□□□ -0.9
HDAC4-208ENST00000463007 RASL10AQ92737 203 aa9.44□□□□□ -0.9
HDAC4-208ENST00000463007 ZNF256Q9Y2P7 627 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-208ENST00000463007 TRAV26-1A0A087WT03 109 aa9.43□□□□□ -0.9
HDAC4-208ENST00000463007 OPRPNQ99935 248 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-208ENST00000463007 CNFNQ9BYD5 112 aa9.43□□□□□ -0.9
HDAC4-208ENST00000463007 BPESC1Q9GZL8 116 aa9.43□□□□□ -0.9
HDAC4-208ENST00000463007 BEX4Q9NWD9 120 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-208ENST00000463007 CFAP46Q8IYW2 2715 aa9.43□□□□□ -0.9
HDAC4-208ENST00000463007 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-208ENST00000463007 SLC50A1Q9BRV3 221 aa9.42□□□□□ -0.9
HDAC4-208ENST00000463007 MYO18BQ8IUG5 2567 aa9.42□□□□□ -0.9
HDAC4-208ENST00000463007 C19orf54Q5BKX5 351 aa9.42□□□□□ -0.9
HDAC4-208ENST00000463007 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
HDAC4-208ENST00000463007 FAM110DQ8TAY7 271 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-208ENST00000463007 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
HDAC4-208ENST00000463007 ACACBO00763 2458 aa9.42□□□□□ -0.9
HDAC4-208ENST00000463007 TRBV7-3A0A075B6L6 115 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 GNLYP22749 145 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 ATP6V0BQ99437 205 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 FLNCQ14315 2725 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 EDN2P20800 178 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 CRYBA4P53673 196 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 NFE4Q86UQ8 179 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 EEF1AKMT3Q96AZ1 226 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
HDAC4-208ENST00000463007 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 MT-ATP8P03928 68 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 Q6ZS46 218 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 C11orf86A6NJI1 115 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 ASIPP42127 132 aa9.4□□□□□ -0.9
HDAC4-208ENST00000463007 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.91
HDAC4-208ENST00000463007 JMJD1CQ15652 2540 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms