RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 A8MWV9 139 aa9.64□□□□□ -0.87
APP-211ENST00000462267 PHOX2AO14813 284 aa9.64□□□□□ -0.87
APP-211ENST00000462267 HLA-DQA1P01909 254 aa9.64□□□□□ -0.87
APP-211ENST00000462267 CRPP02741 224 aa9.64□□□□□ -0.87
APP-211ENST00000462267 SULT1A1P50225 295 aa9.64□□□□□ -0.87
APP-211ENST00000462267 HBG1P69891 147 aa9.64□□□□□ -0.87
APP-211ENST00000462267 HBG2P69892 147 aa9.64□□□□□ -0.87
APP-211ENST00000462267 SPANXN2Q5MJ10 180 aa9.64□□□□□ -0.87
APP-211ENST00000462267 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
APP-211ENST00000462267 NPCDR1Q9BY65 106 aa9.64□□□□□ -0.87
APP-211ENST00000462267 LSM5Q9Y4Y9 91 aaKnown RBP9.64□□□□□ -0.87
APP-211ENST00000462267 MUC2Q02817 5179 aa9.64□□□□□ -0.87
APP-211ENST00000462267 OR7C2O60412 319 aa9.63□□□□□ -0.87
APP-211ENST00000462267 ATP6V1FQ16864 119 aa9.63□□□□□ -0.87
APP-211ENST00000462267 PYDC2Q56P42 97 aa9.63□□□□□ -0.87
APP-211ENST00000462267 TVP23CQ96ET8 276 aa9.63□□□□□ -0.87
APP-211ENST00000462267 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
APP-211ENST00000462267 KIF25-AS1Q9Y6Z4 181 aa9.63□□□□□ -0.87
APP-211ENST00000462267 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
APP-211ENST00000462267 NDUFB6O95139 128 aa9.62□□□□□ -0.87
APP-211ENST00000462267 PIK3CD-AS1Q5SR53 167 aa9.62□□□□□ -0.87
APP-211ENST00000462267 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
APP-211ENST00000462267 STX12Q86Y82 276 aa9.62□□□□□ -0.87
APP-211ENST00000462267 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
APP-211ENST00000462267 CMTM2Q8TAZ6 248 aa9.62□□□□□ -0.87
APP-211ENST00000462267 HYLS1Q96M11 299 aa9.62□□□□□ -0.87
APP-211ENST00000462267 NMES1Q9C002 83 aa9.62□□□□□ -0.87
APP-211ENST00000462267 NDUFA13Q9P0J0 144 aa9.62□□□□□ -0.87
APP-211ENST00000462267 TAAR5O14804 337 aa9.61□□□□□ -0.87
APP-211ENST00000462267 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
APP-211ENST00000462267 PVALBP20472 110 aaPredicted RBP9.61□□□□□ -0.87
APP-211ENST00000462267 CNBPP62633 177 aaKnown RBP9.61□□□□□ -0.87
APP-211ENST00000462267 UBE2L3P68036 154 aaKnown RBP9.61□□□□□ -0.87
APP-211ENST00000462267 CLRN3Q8NCR9 226 aa9.61□□□□□ -0.87
APP-211ENST00000462267 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
APP-211ENST00000462267 MITD1Q8WV92 249 aa9.61□□□□□ -0.87
APP-211ENST00000462267 LYRM2Q9NU23 88 aaPredicted RBP9.61□□□□□ -0.87
APP-211ENST00000462267 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
APP-211ENST00000462267 C11orf21Q9P2W6 132 aa9.61□□□□□ -0.87
APP-211ENST00000462267 FLVCR2Q9UPI3 526 aa9.61□□□□□ -0.87
APP-211ENST00000462267 TMEM262E9PQX1 116 aa9.6□□□□□ -0.87
APP-211ENST00000462267 MIAQ16674 131 aa9.6□□□□□ -0.87
APP-211ENST00000462267 UFSP1Q6NVU6 142 aa9.6□□□□□ -0.87
APP-211ENST00000462267 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
APP-211ENST00000462267 TMEM252Q8N6L7 170 aa9.6□□□□□ -0.87
APP-211ENST00000462267 ARL6IP6Q8N6S5 226 aa9.6□□□□□ -0.87
APP-211ENST00000462267 C15orf54Q8N8G6 183 aa9.6□□□□□ -0.87
APP-211ENST00000462267 OR2G3Q8NGZ4 309 aa9.6□□□□□ -0.87
APP-211ENST00000462267 SPACA4Q8TDM5 124 aa9.6□□□□□ -0.87
APP-211ENST00000462267 SLIRPQ9GZT3 109 aaKnown RBP9.6□□□□□ -0.87
APP-211ENST00000462267 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
APP-211ENST00000462267 IGHV3-64A0A075B6Q5 118 aa9.59□□□□□ -0.87
APP-211ENST00000462267 IGSF23A1L1A6 192 aa9.59□□□□□ -0.87
APP-211ENST00000462267 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
APP-211ENST00000462267 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
APP-211ENST00000462267 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
APP-211ENST00000462267 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
APP-211ENST00000462267 CHTF8P0CG12 524 aa9.58□□□□□ -0.88
APP-211ENST00000462267 SPINK6Q6UWN8 80 aa9.58□□□□□ -0.88
APP-211ENST00000462267 NDFIP1Q9BT67 221 aa9.58□□□□□ -0.88
APP-211ENST00000462267 KCNIP2Q9NS61 270 aa9.58□□□□□ -0.88
APP-211ENST00000462267 RHODO00212 210 aa9.57□□□□□ -0.88
APP-211ENST00000462267 CCSO14618 274 aa9.57□□□□□ -0.88
APP-211ENST00000462267 ZNF80P51504 273 aaPredicted RBP9.57□□□□□ -0.88
APP-211ENST00000462267 THAP6Q8TBB0 222 aa9.57□□□□□ -0.88
APP-211ENST00000462267 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
APP-211ENST00000462267 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
APP-211ENST00000462267 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
APP-211ENST00000462267 MPV17L2Q567V2 206 aa9.56□□□□□ -0.88
APP-211ENST00000462267 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
APP-211ENST00000462267 V9GYH0 126 aa9.56□□□□□ -0.88
APP-211ENST00000462267 S100A5P33763 92 aa9.55□□□□□ -0.88
APP-211ENST00000462267 TAS2R45P59539 299 aa9.55□□□□□ -0.88
APP-211ENST00000462267 KHDC3LQ587J8 217 aa9.55□□□□□ -0.88
APP-211ENST00000462267 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
APP-211ENST00000462267 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
APP-211ENST00000462267 JPT2Q9H910 190 aa9.55□□□□□ -0.88
APP-211ENST00000462267 OR5AC2Q9NZP5 309 aa9.55□□□□□ -0.88
APP-211ENST00000462267 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
APP-211ENST00000462267 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
APP-211ENST00000462267 hDV102S1A0JD36 115 aa9.54□□□□□ -0.88
APP-211ENST00000462267 GCGP01275 180 aa9.54□□□□□ -0.88
APP-211ENST00000462267 S100A4P26447 101 aaKnown RBP9.54□□□□□ -0.88
APP-211ENST00000462267 S100A10P60903 97 aa9.54□□□□□ -0.88
APP-211ENST00000462267 UBE2D3P61077 147 aa9.54□□□□□ -0.88
APP-211ENST00000462267 PKIAP61925 76 aa9.54□□□□□ -0.88
APP-211ENST00000462267 UBE2D2P62837 147 aa9.54□□□□□ -0.88
APP-211ENST00000462267 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
APP-211ENST00000462267 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
APP-211ENST00000462267 AP5S1Q9NUS5 200 aa9.54□□□□□ -0.88
APP-211ENST00000462267 MBD2Q9UBB5 411 aa9.54□□□□□ -0.88
APP-211ENST00000462267 PRR34Q9NV39 138 aa9.53□□□□□ -0.88
APP-211ENST00000462267 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
APP-211ENST00000462267 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
APP-211ENST00000462267 SGK494Q96LW2 274 aa9.52□□□□□ -0.89
APP-211ENST00000462267 BATF3Q9NR55 127 aa9.52□□□□□ -0.89
APP-211ENST00000462267 A6NHS1 94 aa9.51□□□□□ -0.89
APP-211ENST00000462267 C17orf112F2Z3M2 114 aa9.51□□□□□ -0.89
APP-211ENST00000462267 GNG5P63218 68 aa9.51□□□□□ -0.89
APP-211ENST00000462267 ZFP69Q49AA0 526 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms