RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 FAM213BQ8TBF2 198 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 C18orf32Q8TCD1 76 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 TSKUQ8WUA8 353 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 DIRC1Q969H9 104 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 SMDT1Q9H4I9 107 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 ARHGEF12Q9NZN5 1544 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 DIP2CQ9Y2E4 1556 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 TANC2Q9HCD6 1990 aa2.4□□□□□ -2.03
CKAP2-204ENST00000459902 IQSEC2Q5JU85 1478 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 LRRC9Q6ZRR7 1453 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 MICAL3Q7RTP6 2002 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 KDM3BQ7LBC6 1761 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 TOPAZ1Q8N9V7 1692 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 TRBV24-1A0A075B6N3 115 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 IGKV1-12A0A0C4DH73 117 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 UBE2L5PA0A1B0GUS4 154 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 ZNF736B4DX44 427 aaPredicted RBP2.39□□□□□ -2.03
CKAP2-204ENST00000459902 H3BUT2 72 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 ATOX1O00244 68 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 CREBL2O60519 120 aaPredicted RBP2.39□□□□□ -2.03
CKAP2-204ENST00000459902 IGKV1D-12P01611 117 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 SSR2P43308 183 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 ATP5EP56381 51 aaPredicted RBP2.39□□□□□ -2.03
CKAP2-204ENST00000459902 PCBD1P61457 104 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 BLCAPP62952 87 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 UBE2L3P68036 154 aaKnown RBP2.39□□□□□ -2.03
CKAP2-204ENST00000459902 WFDC2Q14508 124 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 SS18Q15532 418 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 NMSQ5H8A3 153 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 OR5AS1Q8N127 324 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 OR2T35Q8NGX2 323 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 MYOZ3Q8TDC0 251 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 FGF13Q92913 245 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 OSTCQ9NRP0 149 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 TMEM242Q9NWH2 141 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 NUP98P52948 1817 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 CDK12Q9NYV4 1490 aaPredicted RBP2.39□□□□□ -2.03
CKAP2-204ENST00000459902 MAP3K4Q9Y6R4 1608 aa2.39□□□□□ -2.03
CKAP2-204ENST00000459902 LAMB1P07942 1786 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 RGPD2P0DJD1 1756 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ARFGEF2Q9Y6D5 1785 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ATAD5Q96QE3 1844 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ZFC3H1O60293 1989 aaKnown RBP2.38□□□□□ -2.03
CKAP2-204ENST00000459902 PTPRBP23467 1997 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 IGHV3OR15-7A0A075B7D8 119 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 hADV29S1A0JD25 119 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 NAP1L6A6NFF2 107 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 C19orf84I3L1E1 186 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 TIMM17BO60830 172 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ZNF737O75373 536 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 IGKV1-16P04430 117 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 RGPD1P0DJD0 1748 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 CCL4P13236 92 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
CKAP2-204ENST00000459902 RPL18Q07020 188 aaKnown RBP2.38□□□□□ -2.03
CKAP2-204ENST00000459902 CIRBPQ14011 172 aaKnown RBP2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ITSN1Q15811 1721 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 NOXRED1Q6NXP6 359 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 C10orf71Q711Q0 1435 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 C5orf38Q86SI9 138 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 Q8NDZ9 215 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 MGST2Q99735 147 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 TAS2R4Q9NYW5 299 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 ANKRD50Q9ULJ7 1429 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 LAMC3Q9Y6N6 1575 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 RGPD8O14715 1765 aaPredicted RBP2.38□□□□□ -2.03
CKAP2-204ENST00000459902 RGPD5Q99666 1765 aa2.38□□□□□ -2.03
CKAP2-204ENST00000459902 TRPM6Q9BX84 2022 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 XRN1Q8IZH2 1706 aaKnown RBP2.37□□□□□ -2.03
CKAP2-204ENST00000459902 GLI2P10070 1586 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 MED1Q15648 1581 aaPredicted RBP2.37□□□□□ -2.03
CKAP2-204ENST00000459902 PTPRDP23468 1912 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 KANTRA0A1W2PQU2 76 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 LEPROTO15243 131 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 LYRM1O43325 122 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
CKAP2-204ENST00000459902 CCL8P80075 99 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 ZNF345Q14585 488 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 SPATA12Q7Z6I5 190 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 FAM216BQ8N7L0 139 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 CLDND2Q8NHS1 167 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 OR8B2Q96RD0 313 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 BTAF1O14981 1849 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 PDCD11Q14690 1871 aaKnown RBP2.37□□□□□ -2.03
CKAP2-204ENST00000459902 TANC1Q9C0D5 1861 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 DSCAML1Q8TD84 2053 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 ARHGEF28Q8N1W1 1705 aaKnown RBP2.37□□□□□ -2.03
CKAP2-204ENST00000459902 IFT172Q9UG01 1749 aa2.37□□□□□ -2.03
CKAP2-204ENST00000459902 MDFIC2A0A1B0GVS7 189 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 UMAD1C9J7I0 102 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 C17orf112F2Z3M2 114 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 J3QKU1 62 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 PATE2Q6UY27 113 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 SOSTDC1Q6X4U4 206 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 ATP11AUNQ6ZP68 121 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 MIR17HGQ75NE6 70 aa2.36□□□□□ -2.03
CKAP2-204ENST00000459902 COMMD6Q7Z4G1 85 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms