RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 V9GYV3 84 aa11.98□□□□□ -0.49
TRIM39-211ENST00000458516 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 TRGV1A0A0A0MS02 117 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 XKRY2A2RUG3 117 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 SNAI2O43623 268 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 NDUFA5Q16718 116 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
TRIM39-211ENST00000458516 GAGE12BA1L429 117 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 GAGE7O76087 117 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 OR5AL1P0C617 328 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 DAD1P61803 113 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 FER1L6-AS1Q8NA97 138 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 RASL10AQ92737 203 aa11.96□□□□□ -0.49
TRIM39-211ENST00000458516 SSBP4Q9BWG4 385 aaPredicted RBP11.96□□□□□ -0.49
TRIM39-211ENST00000458516 A8MWL6 223 aa11.95□□□□□ -0.5
TRIM39-211ENST00000458516 PTH2Q96A98 100 aa11.95□□□□□ -0.5
TRIM39-211ENST00000458516 RNF212Q495C1 297 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 Q6ZTC4 211 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 OR10AG1Q8NH19 301 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 TSKUQ8WUA8 353 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
TRIM39-211ENST00000458516 A0A1W2PPQ1 181 aa11.93□□□□□ -0.5
TRIM39-211ENST00000458516 NXPH4O95158 308 aa11.93□□□□□ -0.5
TRIM39-211ENST00000458516 ZNF876PQ49A33 203 aa11.93□□□□□ -0.5
TRIM39-211ENST00000458516 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
TRIM39-211ENST00000458516 TPPP3Q9BW30 176 aa11.93□□□□□ -0.5
TRIM39-211ENST00000458516 MUC21A0A0G2JKD1 596 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 MUC21A0A140T8X8 626 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 CTRLP40313 264 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 LYZL1Q6UWQ5 148 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 ZFP82Q8N141 532 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 NDUFAF3Q9BU61 184 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 GFRA4Q9GZZ7 299 aa11.92□□□□□ -0.5
TRIM39-211ENST00000458516 TRGV2A0A075B6R0 118 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 M0R381 172 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 PPP1R2P9O14990 202 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 MT-ND4LP03901 98 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
TRIM39-211ENST00000458516 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 SYT8Q8NBV8 401 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
TRIM39-211ENST00000458516 FAM231BA6NCW3 169 aa11.9□□□□□ -0.5
TRIM39-211ENST00000458516 F2Z2F3 143 aa11.9□□□□□ -0.5
TRIM39-211ENST00000458516 APOC3P02656 99 aa11.9□□□□□ -0.5
TRIM39-211ENST00000458516 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
TRIM39-211ENST00000458516 IGHV4-4A0A075B6R2 117 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 RS1O15537 224 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 ATP5G1P05496 136 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 CACNG7P62955 275 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 PGLYRP4Q96LB8 373 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 CNFNQ9BYD5 112 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 JPT2Q9H910 190 aa11.89□□□□□ -0.51
TRIM39-211ENST00000458516 TRAV10A0A0B4J240 114 aa11.88□□□□□ -0.51
TRIM39-211ENST00000458516 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
TRIM39-211ENST00000458516 CFAP126Q5VTH2 177 aa11.88□□□□□ -0.51
TRIM39-211ENST00000458516 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
TRIM39-211ENST00000458516 MUC7Q8TAX7 377 aa11.88□□□□□ -0.51
TRIM39-211ENST00000458516 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
TRIM39-211ENST00000458516 ZNF479Q96JC4 524 aa11.88□□□□□ -0.51
TRIM39-211ENST00000458516 DYNC2H1Q8NCM8 4307 aaKnown RBP11.88□□□□□ -0.51
TRIM39-211ENST00000458516 C7orf77A4D0Y5 90 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 A8MWV9 139 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 HTN3P15516 51 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 HOXA5P20719 270 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 SSTP61278 116 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 RHEBQ15382 184 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 OR4C5Q8NGB2 326 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 NAT8BQ9UHF3 227 aa11.87□□□□□ -0.51
TRIM39-211ENST00000458516 DEFB131BA0A096LNP1 70 aa11.86□□□□□ -0.51
TRIM39-211ENST00000458516 NTF3P20783 257 aa11.86□□□□□ -0.51
TRIM39-211ENST00000458516 UFSP1Q6NVU6 142 aa11.86□□□□□ -0.51
TRIM39-211ENST00000458516 SVBPQ8N300 66 aa11.86□□□□□ -0.51
TRIM39-211ENST00000458516 SAMD10Q9BYL1 202 aa11.86□□□□□ -0.51
TRIM39-211ENST00000458516 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
TRIM39-211ENST00000458516 STARD9Q9P2P6 4700 aa11.85□□□□□ -0.51
TRIM39-211ENST00000458516 A0A087WWC5 75 aa11.84□□□□□ -0.51
TRIM39-211ENST00000458516 F5H768 121 aa11.84□□□□□ -0.51
TRIM39-211ENST00000458516 SNAPINO95295 136 aa11.84□□□□□ -0.51
TRIM39-211ENST00000458516 CRYGDP07320 174 aa11.84□□□□□ -0.51
TRIM39-211ENST00000458516 FHL2Q14192 279 aa11.84□□□□□ -0.51
TRIM39-211ENST00000458516 AP1S3Q96PC3 154 aa11.84□□□□□ -0.51
TRIM39-211ENST00000458516 A0A087WWL8 130 aa11.83□□□□□ -0.52
TRIM39-211ENST00000458516 A0A1B0GUT8 65 aa11.83□□□□□ -0.52
TRIM39-211ENST00000458516 TWIST1Q15672 202 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms