RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 H3BUT2 72 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 GNRH2O43555 120 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 CDKN1BP46527 198 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 DEFB112Q30KQ8 113 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 Q6ZS46 218 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 CEND1Q8N111 149 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
RFX3-211ENST00000458034 DCANP1Q8TF63 244 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 RPL39LQ96EH5 51 aaKnown RBP8.22□□□□□ -1.09
RFX3-211ENST00000458034 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 CYSLTR1Q9Y271 337 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 KALRNO60229 2985 aa8.21□□□□□ -1.09
RFX3-211ENST00000458034 IGHV4OR15-8A0A075B7B6 117 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 A0A087WW49 117 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 A0A1W2PPM0 123 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 OR11H12B2RN74 326 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 LGALS9O00182 355 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 ELANEP08246 267 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 FABP2P12104 132 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 C2orf66Q6UXQ4 117 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 OR11H1Q8NG94 326 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 OR11H2Q8NH07 326 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 TM2D2Q9BX73 214 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 CSTL1Q9H114 145 aa8.21□□□□□ -1.1
RFX3-211ENST00000458034 GAGE12BA1L429 117 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 K7ERU9 68 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 VCYO14598 125 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 IGHV4-59P01825 116 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
RFX3-211ENST00000458034 CD7P09564 240 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 COX6B1P14854 86 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 SRD5A1P18405 259 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 DEFB1P60022 68 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 HERVK_113P61574 105 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 RAB37Q96AX2 223 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 CACNA1BQ00975 2339 aa8.2□□□□□ -1.1
RFX3-211ENST00000458034 A0A0J9YX75 114 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 K7EQG2 157 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 RBX1P62877 108 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 VPREB3Q9UKI3 123 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 SPCS1Q9Y6A9 102 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
RFX3-211ENST00000458034 TRGV11A0A075B6L2 103 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 TRAV12-3A0A0B4J271 114 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 TRBV6-5A0A0K0K1A5 114 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 E9PLD3 99 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 FXYD2P54710 66 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 TMEM95Q3KNT9 176 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 C9orf85Q96MD7 179 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 LRBAP50851 2863 aa8.18□□□□□ -1.1
RFX3-211ENST00000458034 IGHV1OR15-1A0A075B7D0 117 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 IGHV3-16A0A0C4DH30 117 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 F5H697 171 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 POLR2KP53803 58 aaKnown RBP8.17□□□□□ -1.1
RFX3-211ENST00000458034 RIPPLY3P57055 190 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 LINC00315P59091 139 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 RHOHQ15669 191 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 RNF152Q8N8N0 203 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 HIST1H4GQ99525 98 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
RFX3-211ENST00000458034 A0A096LNT2 108 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 A6NJY4 79 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 SPRY2O43597 315 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 TGFAP01135 160 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 PMVKQ15126 192 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 Q6YL49 198 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 TRPT1Q86TN4 253 aaKnown RBP8.16□□□□□ -1.1
RFX3-211ENST00000458034 MAPKAPK5-AS1Q8N8E1 139 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 UBE2E2Q96LR5 201 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 MUC4Q99102 2169 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 NHP2Q9NX24 153 aaKnown RBP8.16□□□□□ -1.1
RFX3-211ENST00000458034 TP53TG1Q9Y2A0 90 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 DCHS2Q6V1P9 2916 aa8.16□□□□□ -1.1
RFX3-211ENST00000458034 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
RFX3-211ENST00000458034 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
RFX3-211ENST00000458034 FSHBP01225 129 aa8.15□□□□□ -1.1
RFX3-211ENST00000458034 EDN2P20800 178 aa8.15□□□□□ -1.1
RFX3-211ENST00000458034 ZNF56Q15929 161 aa8.15□□□□□ -1.1
RFX3-211ENST00000458034 VPS25Q9BRG1 176 aa8.15□□□□□ -1.1
RFX3-211ENST00000458034 AKAP6Q13023 2319 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms