RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 GRIFINA4D1Z8 144 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 SPINK4O60575 86 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 APCSP02743 223 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 TRGC1P0CF51 173 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 CAMPP49913 170 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 ZNF124Q15973 351 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 MUC21Q5SSG8 566 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 SPANXN1Q5VSR9 72 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 ZFP82Q8N141 532 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 PTH2Q96A98 100 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 TMEM191AQ9H0A3 160 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 PHLDA3Q9Y5J5 127 aa6.53□□□□□ -1.36
CDC42EP3-204ENST00000457889 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 CBY3A6NI87 242 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 H3BVH4 76 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 PPBPP02775 128 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 S100A6P06703 90 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 NTF3P20783 257 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 APOC4P55056 127 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 RIPPLY3P57055 190 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 ZNF415Q09FC8 603 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 TWIST1Q15672 202 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 Q8N1Y9 231 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 C9orf85Q96MD7 179 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 AP1S3Q96PC3 154 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 SPXQ9BT56 116 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 TMEM208Q9BTX3 173 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 CSTL1Q9H114 145 aa6.52□□□□□ -1.37
CDC42EP3-204ENST00000457889 LOC102724200A0A096LPH7 203 aaPredicted RBP6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 A8MZ25 164 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 UBE2CO00762 179 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 COA6Q5JTJ3 125 aaKnown RBP6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 DEFB125Q8N687 156 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 OR10AG1Q8NH19 301 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 LINC01587Q99440 93 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 XCL2Q9UBD3 114 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
CDC42EP3-204ENST00000457889 GNRH2O43555 120 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 RBMY1A1P0DJD3 496 aaKnown RBP6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 RBMY1CP0DJD4 496 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 FXYD7P58549 80 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 SLAQ13239 276 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 RBMY1FQ15415 496 aaKnown RBP6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 OR10J3Q5JRS4 329 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 FAM104BQ5XKR9 115 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 ZNF705AQ6ZN79 300 aaPredicted RBP6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 Q6ZQT7 251 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 WFDC10AQ9H1F0 79 aa6.5□□□□□ -1.37
CDC42EP3-204ENST00000457889 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 PPP1R17O96001 155 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 GIG44P09565 113 aaPredicted RBP6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 RPL35AP18077 110 aaKnown RBP6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 Q0VG73 95 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 CSNK1G2-AS1Q8NCQ2 148 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 C16orf74Q96GX8 76 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 DPH3P1Q9H4G8 78 aa6.49□□□□□ -1.37
CDC42EP3-204ENST00000457889 M0R2P5 195 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 M0R381 172 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 ORMDL3Q8N138 153 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 RNASE8Q8TDE3 154 aaKnown RBP6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 ALKBH7Q9BT30 221 aaPredicted RBP6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 GSN-AS1Q9NRJ2 163 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 MDFICQ9P1T7 246 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 TIMM8BQ9Y5J9 83 aaPredicted RBP6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 U3KQK5 164 aa6.48□□□□□ -1.37
CDC42EP3-204ENST00000457889 C5orf52A6NGY3 159 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 A8MWV9 139 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 RHODO00212 210 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 SRIP30626 198 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 DAZ2Q13117 558 aaKnown RBP6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 RRN3P1Q2M238 152 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 LGALS9BQ3B8N2 356 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 KRTAP21-3Q3LHN1 58 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 ZNF876PQ49A33 203 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 Q6ZWC4 215 aa6.47□□□□□ -1.37
CDC42EP3-204ENST00000457889 POM121L12Q8N7R1 296 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms