RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MUC4Q99102 2169 aa11.9□□□□□ -0.5
CCDC90B-202ENST00000455220 DAZ2Q13117 558 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-202ENST00000455220 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.5
CCDC90B-202ENST00000455220 SPXQ9BT56 116 aa11.9□□□□□ -0.5
CCDC90B-202ENST00000455220 COL7A1Q02388 2944 aa11.9□□□□□ -0.51
CCDC90B-202ENST00000455220 SNURFLB1AK76 121 aa11.89□□□□□ -0.51
CCDC90B-202ENST00000455220 CTRLP40313 264 aa11.89□□□□□ -0.51
CCDC90B-202ENST00000455220 C11orf68Q9H3H3 251 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-202ENST00000455220 HIGD1CA8MV81 97 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 TIMM8BQ9Y5J9 83 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 F2Z2F3 143 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 LYZL1Q6UWQ5 148 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 PTH2Q96A98 100 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 NAT8BQ9UHF3 227 aa11.88□□□□□ -0.51
CCDC90B-202ENST00000455220 DEFB4AO15263 64 aa11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 SPINK4O60575 86 aa11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 NXPH4O95158 308 aa11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 OR10AG1Q8NH19 301 aa11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-202ENST00000455220 M0R2P5 195 aa11.86□□□□□ -0.51
CCDC90B-202ENST00000455220 EMP1P54849 157 aa11.86□□□□□ -0.51
CCDC90B-202ENST00000455220 LGALS9BQ3B8N2 356 aa11.86□□□□□ -0.51
CCDC90B-202ENST00000455220 PIK3CD-AS1Q5SR53 167 aa11.86□□□□□ -0.51
CCDC90B-202ENST00000455220 WDR73Q6P4I2 378 aa11.86□□□□□ -0.51
CCDC90B-202ENST00000455220 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
CCDC90B-202ENST00000455220 STAB2Q8WWQ8 2551 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 IGHV4-4A0A075B6R2 117 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 CXorf65A6NEN9 183 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 RASL10AQ92737 203 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 NDUFAF3Q9BU61 184 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 DKK2Q9UBU2 259 aa11.85□□□□□ -0.51
CCDC90B-202ENST00000455220 CACNG7P62955 275 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 ZFP82Q8N141 532 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 MUC21A0A0G2JKD1 596 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 A0A0J9YWU9 116 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 MUC21A0A140T8X8 626 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 Q6ZTI0 123 aa11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 MRPL16Q9NX20 251 aaKnown RBP11.84□□□□□ -0.51
CCDC90B-202ENST00000455220 TRGV1A0A0A0MS02 117 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 A0A1B0GUT8 65 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 TEX48A0A1B0GUV7 120 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 M0R381 172 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 KCNIP4Q6PIL6 250 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 SYT8Q8NBV8 401 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
CCDC90B-202ENST00000455220 TRAV9-1A0A075B6T8 112 aa11.82□□□□□ -0.52
CCDC90B-202ENST00000455220 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
CCDC90B-202ENST00000455220 NTF3P20783 257 aa11.81□□□□□ -0.52
CCDC90B-202ENST00000455220 S100PP25815 95 aa11.81□□□□□ -0.52
CCDC90B-202ENST00000455220 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
CCDC90B-202ENST00000455220 C18orf15Q96N68 181 aa11.81□□□□□ -0.52
CCDC90B-202ENST00000455220 ATP5L2Q7Z4Y8 100 aa11.8□□□□□ -0.52
CCDC90B-202ENST00000455220 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
CCDC90B-202ENST00000455220 SMCO4Q9NRQ5 59 aa11.8□□□□□ -0.52
CCDC90B-202ENST00000455220 MSRB1Q9NZV6 116 aa11.8□□□□□ -0.52
CCDC90B-202ENST00000455220 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
CCDC90B-202ENST00000455220 TGP01266 2768 aa11.8□□□□□ -0.52
CCDC90B-202ENST00000455220 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 GAGE7O76087 117 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 RIGQ13278 110 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 CBLN2Q8IUK8 224 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 YPEL4Q96NS1 127 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 U3KQK5 164 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 A0A1B0GW15 77 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 SSTP61278 116 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 ELOBQ15370 118 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 TWIST1Q15672 202 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
CCDC90B-202ENST00000455220 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 A8MWV9 139 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 RS1O15537 224 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 DEFB130BP0DP73 79 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 DEFB130AP0DP74 79 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 POM121L12Q8N7R1 296 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 AP1S3Q96PC3 154 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 JPT2Q9H910 190 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 EDA2RQ9HAV5 297 aa11.78□□□□□ -0.52
CCDC90B-202ENST00000455220 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
CCDC90B-202ENST00000455220 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
CCDC90B-202ENST00000455220 DAD1P61803 113 aa11.77□□□□□ -0.53
CCDC90B-202ENST00000455220 HBBP68871 147 aa11.77□□□□□ -0.53
CCDC90B-202ENST00000455220 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
CCDC90B-202ENST00000455220 CFAP126Q5VTH2 177 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms