RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 UPK2O00526 184 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 PPP1R17O96001 155 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CECR9P0C854 216 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 RNASE2P10153 161 aaKnown RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 RPL7P18124 248 aaKnown RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CFHR2P36980 270 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 DLX6P56179 175 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 GOLT1AQ6ZVE7 132 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 AMN1Q8IY45 258 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 Q8N8P6 123 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNRF2Q8NHG8 242 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 COPS9Q8WXC6 57 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 SRXN1Q9BYN0 137 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 FGF23Q9GZV9 251 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 DYNLRB1Q9NP97 96 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRR34Q9NV39 138 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CALYQ9NYX4 217 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 CHCHD2Q9Y6H1 151 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 DSCAML1Q8TD84 2053 aa3.18□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF318Q5VUA4 2279 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMSB15BA0A087X1C1 80 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGKV2D-26A0A0A0MRZ7 120 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-43A0A0B4J1X8 118 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV4A0A0B4J268 109 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 A0A0J9YW62 118 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IQCF6A8MYZ5 107 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 F5H768 121 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TCL1BO95988 128 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 CRYGBP07316 175 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 SAA2P0DJI9 122 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-43DP0DP04 118 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 GLRXP35754 106 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 CXCL5P42830 114 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 C1orf61Q13536 156 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 VMA21Q3ZAQ7 101 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 TMEM155Q4W5P6 130 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 NDUFA11Q86Y39 141 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZCCHC24Q8N2G6 241 aaKnown RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 FLYWCH2Q96CP2 140 aaKnown RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC00526Q96FQ7 95 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC01600Q96MT4 127 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 MRPL35Q9NZE8 188 aaKnown RBP3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 PRO1854Q9UHT4 67 aa3.17□□□□□ -1.9
HMGB1P16-201ENST00000447155 ZNF407Q9C0G0 2248 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGKV1OR2-108A0A075B7D4 117 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 TRAV40A0A0B4J280 105 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CYSRT1A8MQ03 144 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 LGALS9O00182 355 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CXCL13O43927 109 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV3-23P01764 117 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 ORM1P02763 201 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CD24P25063 80 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 HERVK_113P63121 156 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 DEFB103AP81534 67 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 ALKBH6Q3KRA9 238 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 RPL39P5Q59GN2 51 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 KIR2DL5BQ8NHK3 375 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 LINC01587Q99440 93 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 CNFNQ9BYD5 112 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 C21orf62Q9NYP8 219 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 HHLA3Q9XRX5 114 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 KLF13Q9Y2Y9 288 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 ATRXP46100 2492 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 EP400Q96L91 3159 aa3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 HEATR1Q9H583 2144 aaKnown RBP3.16□□□□□ -1.9
HMGB1P16-201ENST00000447155 IGHV1OR21-1A0A087WYE8 117 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV7-81A0A0B4J1V7 117 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV1-69DA0A0B4J2H0 117 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 EPOPA6NHQ4 379 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 K7EM74 188 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 M0R3E3 92 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 RS1O15537 224 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 TIMM8AO60220 97 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 SH2D1AO60880 128 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 NDUFA3O95167 84 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGLV3-19P01714 112 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRACP01848 142 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 SAA1P0DJI8 122 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 INAFM2P0DMQ5 153 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00694P0DN24 101 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 CCL3P10147 92 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 CRYGAP11844 174 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 COX7CP15954 63 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LGALS3P17931 250 aaKnown RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 COL8A2P25067 703 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LYZP61626 148 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LOXL1Q08397 574 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 C2orf82Q6UX34 121 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 C16orf47Q6ZP98 133 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM19A5Q7Z5A7 132 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms