RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 SSBP4Q9BWG4 385 aaPredicted RBP12.45□□□□□ -0.42
SGCE-206ENST00000445866 RPS10P5Q9NQ39 176 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 DKK2Q9UBU2 259 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 CXorf65A6NEN9 183 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 F2Z2F3 143 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 M0R2P5 195 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 ZNF876PQ49A33 203 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 SCRT2Q9NQ03 307 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 LYRM9A8MSI8 78 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 SPINK4O60575 86 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 DEFB130BP0DP73 79 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 DEFB130AP0DP74 79 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 MED14OSP0DP75 135 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 RHEBQ15382 184 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 IL17DQ8TAD2 202 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 PGLYRP4Q96LB8 373 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 CTDSP1Q9GZU7 261 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 GFRA4Q9GZZ7 299 aa12.44□□□□□ -0.42
SGCE-206ENST00000445866 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
SGCE-206ENST00000445866 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 GAGE7O76087 117 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 FOXA3P55318 350 aaPredicted RBP12.43□□□□□ -0.42
SGCE-206ENST00000445866 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 Q6ZTI0 123 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 CELA1Q9UNI1 258 aa12.43□□□□□ -0.42
SGCE-206ENST00000445866 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 HIGD1CA8MV81 97 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 M0R381 172 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 SNAI2O43623 268 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 LGALS9BQ3B8N2 356 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 DMRTA1Q5VZB9 504 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 SYT8Q8NBV8 401 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 C11orf45Q8TAV5 145 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 RASL10AQ92737 203 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 NAT8BQ9UHF3 227 aa12.42□□□□□ -0.42
SGCE-206ENST00000445866 TRGV2A0A075B6R0 118 aa12.41□□□□□ -0.42
SGCE-206ENST00000445866 A0A087WWC5 75 aa12.41□□□□□ -0.42
SGCE-206ENST00000445866 TEX48A0A1B0GUV7 120 aa12.41□□□□□ -0.42
SGCE-206ENST00000445866 DAD1P61803 113 aa12.41□□□□□ -0.42
SGCE-206ENST00000445866 NUP35Q8NFH5 326 aa12.41□□□□□ -0.42
SGCE-206ENST00000445866 PTH2Q96A98 100 aa12.41□□□□□ -0.42
SGCE-206ENST00000445866 TENM3Q9P273 2699 aa12.4□□□□□ -0.42
SGCE-206ENST00000445866 FAM3BP58499 235 aaPredicted RBP12.4□□□□□ -0.42
SGCE-206ENST00000445866 ZFP82Q8N141 532 aa12.4□□□□□ -0.42
SGCE-206ENST00000445866 TMEM242Q9NWH2 141 aa12.4□□□□□ -0.42
SGCE-206ENST00000445866 NTF3P20783 257 aa12.39□□□□□ -0.43
SGCE-206ENST00000445866 CACNG7P62955 275 aa12.39□□□□□ -0.43
SGCE-206ENST00000445866 WDR73Q6P4I2 378 aa12.39□□□□□ -0.43
SGCE-206ENST00000445866 ATRAIDQ6UW56 229 aa12.39□□□□□ -0.43
SGCE-206ENST00000445866 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
SGCE-206ENST00000445866 CTRLP40313 264 aa12.38□□□□□ -0.43
SGCE-206ENST00000445866 NANOS2P60321 138 aaKnown RBP12.38□□□□□ -0.43
SGCE-206ENST00000445866 TWIST1Q15672 202 aa12.38□□□□□ -0.43
SGCE-206ENST00000445866 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
SGCE-206ENST00000445866 EDA2RQ9HAV5 297 aa12.38□□□□□ -0.43
SGCE-206ENST00000445866 MSRB1Q9NZV6 116 aa12.38□□□□□ -0.43
SGCE-206ENST00000445866 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
SGCE-206ENST00000445866 A0A1B0GUT8 65 aa12.37□□□□□ -0.43
SGCE-206ENST00000445866 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
SGCE-206ENST00000445866 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
SGCE-206ENST00000445866 IMMP2LQ96T52 175 aa12.37□□□□□ -0.43
SGCE-206ENST00000445866 JPT2Q9H910 190 aa12.37□□□□□ -0.43
SGCE-206ENST00000445866 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
SGCE-206ENST00000445866 S100PP25815 95 aa12.36□□□□□ -0.43
SGCE-206ENST00000445866 KCNIP4Q6PIL6 250 aa12.36□□□□□ -0.43
SGCE-206ENST00000445866 OR4C5Q8NGB2 326 aa12.36□□□□□ -0.43
SGCE-206ENST00000445866 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
SGCE-206ENST00000445866 NXPH4O95158 308 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 IGHV3-53P01767 116 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 RIGQ13278 110 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 NDUFAF3Q9BU61 184 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 A8MWV9 139 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
SGCE-206ENST00000445866 RS1O15537 224 aa12.34□□□□□ -0.43
SGCE-206ENST00000445866 HTN3P15516 51 aa12.34□□□□□ -0.43
SGCE-206ENST00000445866 Q6ZTC4 211 aa12.34□□□□□ -0.43
SGCE-206ENST00000445866 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
SGCE-206ENST00000445866 A0A087WWL8 130 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 IGHV3-73A0A0B4J1V6 119 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 TRAV4A0A0B4J268 109 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 ATP5G1P05496 136 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
SGCE-206ENST00000445866 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 C14orf178Q8N769 122 aaPredicted RBP12.33□□□□□ -0.44
SGCE-206ENST00000445866 ZNF479Q96JC4 524 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 BTF3L4Q96K17 158 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 SAMD10Q9BYL1 202 aa12.33□□□□□ -0.44
SGCE-206ENST00000445866 TRGC1P0CF51 173 aa12.32□□□□□ -0.44
SGCE-206ENST00000445866 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms