RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 A0A087WW49 117 aa8.78□□□□□ -1
FN1-211ENST00000443816 IGLV2-23P01705 113 aa8.78□□□□□ -1
FN1-211ENST00000443816 AJUBAQ96IF1 538 aa8.78□□□□□ -1
FN1-211ENST00000443816 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
FN1-211ENST00000443816 ZFAND6Q6FIF0 208 aa8.78□□□□□ -1
FN1-211ENST00000443816 GAGE2AQ6NT46 116 aa8.78□□□□□ -1
FN1-211ENST00000443816 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
FN1-211ENST00000443816 SIGMAR1Q99720 223 aa8.78□□□□□ -1
FN1-211ENST00000443816 MUC4Q99102 2169 aa8.78□□□□□ -1
FN1-211ENST00000443816 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
FN1-211ENST00000443816 NXPH4O95158 308 aa8.78□□□□□ -1
FN1-211ENST00000443816 ZNF524Q96C55 264 aa8.78□□□□□ -1
FN1-211ENST00000443816 MRPL36Q9P0J6 103 aaKnown RBP8.78□□□□□ -1
FN1-211ENST00000443816 GPHB5Q86YW7 130 aa8.77□□□□□ -1
FN1-211ENST00000443816 Q8N9W7 124 aa8.77□□□□□ -1
FN1-211ENST00000443816 K7EMT4 169 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 Q0VG73 95 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 KRTAP27-1Q3LI81 207 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 C16orf54Q6UWD8 224 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 DYNAPQ8N1N2 210 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 DNAJC9-AS1A6NH13 148 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 CD5LO43866 347 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 C3orf79P0CE67 100 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 C1orf147Q96MC9 270 aaPredicted RBP8.77□□□□□ -1.01
FN1-211ENST00000443816 HERV-K104P63124 156 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 CYYR1Q96J86 154 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 NDUFA12Q9UI09 145 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 IGLV11-55A0A075B6I3 123 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 GNRH2O43555 120 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 ZNF843Q8N446 348 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 ANAPC13Q9BS18 74 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 SPANXA1Q9NS26 97 aa8.77□□□□□ -1.01
FN1-211ENST00000443816 F8VRH5 84 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 TIRAPP58753 221 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 PRR31Q5SQ13 230 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 SLC25A29Q8N8R3 303 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 SPINK8P0C7L1 97 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 KIR3DS1Q14943 382 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 COLCA2A8K830 154 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 COX7A2LO14548 114 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 CITED2Q99967 270 aaPredicted RBP8.76□□□□□ -1.01
FN1-211ENST00000443816 EP400Q96L91 3159 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 SPRNQ5BIV9 151 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 UBL5Q9BZL1 73 aa8.76□□□□□ -1.01
FN1-211ENST00000443816 C9JAW5 83 aa8.75□□□□□ -1.01
FN1-211ENST00000443816 PRRC2AP48634 2157 aaKnown RBP8.75□□□□□ -1.01
FN1-211ENST00000443816 Q8NA96 180 aa8.75□□□□□ -1.01
FN1-211ENST00000443816 LTAP01374 205 aa8.75□□□□□ -1.01
FN1-211ENST00000443816 NDUFS6O75380 124 aaKnown RBP8.75□□□□□ -1.01
FN1-211ENST00000443816 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
FN1-211ENST00000443816 BOD1L2Q8IYS8 172 aa8.75□□□□□ -1.01
FN1-211ENST00000443816 CAMK2N2Q96S95 79 aa8.75□□□□□ -1.01
FN1-211ENST00000443816 ETDCA0A1B0GVM5 59 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 IGHG2P01859 326 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 SPRY2O43597 315 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 TRBV7-3A0A075B6L6 115 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 F6UB75 175 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 H3BQ85 93 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 C21orf62-AS1Q17RA5 79 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 SEM1Q6ZVN7 128 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 RNF138Q8WVD3 245 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 WDR87Q6ZQQ6 2873 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 HIVEP3Q5T1R4 2406 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 ADAMTSL5Q6ZMM2 481 aa8.74□□□□□ -1.01
FN1-211ENST00000443816 MUC22E2RYF6 1773 aaPredicted RBP8.73□□□□□ -1.01
FN1-211ENST00000443816 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 OCIAD2Q56VL3 154 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 C18orf32Q8TCD1 76 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 V9GYV3 84 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 LRRK2Q5S007 2527 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 I3L2K1 104 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 SPRY4Q9C004 299 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 AMTNQ6UX39 209 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 NDUFS5O43920 106 aa8.73□□□□□ -1.01
FN1-211ENST00000443816 ZFP36P26651 326 aaKnown RBP8.73□□□□□ -1.01
FN1-211ENST00000443816 EGR2P11161 476 aaPredicted RBP8.72□□□□□ -1.01
FN1-211ENST00000443816 LGALS9BQ3B8N2 356 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 LGALS9CQ6DKI2 356 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.72□□□□□ -1.01
FN1-211ENST00000443816 IGKV2-29A2NJV5 120 aaPredicted RBP8.72□□□□□ -1.01
FN1-211ENST00000443816 K7EIM0 57 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 C17orf77Q96MU5 243 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 HLA-DMBP28068 263 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
FN1-211ENST00000443816 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 A0A1W2PNU3 283 aaPredicted RBP8.72□□□□□ -1.01
FN1-211ENST00000443816 IGLL5B9A064 214 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 IGHV3-30P01768 117 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 IGHV3-30-5P0DP03 117 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 IGHV4-31P0DP07 118 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 CCDC168Q8NDH2 2452 aa8.72□□□□□ -1.01
FN1-211ENST00000443816 NOTCH2Q04721 2471 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms