RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 NAP1L6A6NFF2 107 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 SFT2D2O95562 160 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 CCKP06307 115 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 FAUP35544 74 aaKnown RBP2.63□□□□□ -1.99
VPS50-206ENST00000443443 GNG11P61952 73 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 Q1T7F1 81 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 ZCCHC23Q6ZST2 131 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 Q9BRP9 147 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 RABAC1Q9UI14 185 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 LHFPL6Q9Y693 200 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 ERVK-7P63135 1459 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 MYH1P12882 1939 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 TRBV7-7A0A0K0K1E9 115 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 MRPS14O60783 128 aaKnown RBP2.62□□□□□ -1.99
VPS50-206ENST00000443443 CCL8P80075 99 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 PYDC2Q56P42 97 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 C9orf116Q5BN46 136 aaPredicted RBP2.62□□□□□ -1.99
VPS50-206ENST00000443443 Q8TAT8 98 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 TSLPQ969D9 159 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 SMCO4Q9NRQ5 59 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 IFT140Q96RY7 1462 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 PLXNA3P51805 1871 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 ADGRB3O60242 1522 aa2.62□□□□□ -1.99
VPS50-206ENST00000443443 HELZP42694 1942 aaKnown RBP2.62□□□□□ -1.99
VPS50-206ENST00000443443 ZFC3H1O60293 1989 aaKnown RBP2.61□□□□□ -1.99
VPS50-206ENST00000443443 ROBO1Q9Y6N7 1651 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 IGKV1D-17A0A075B6S4 117 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 TRBV10-3A0A0K0K1G6 114 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 MUC21A0A140T8X8 626 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 IGLC7A0M8Q6 106 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 APOC3P02656 99 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 PRB4P10163 310 aaPredicted RBP2.61□□□□□ -1.99
VPS50-206ENST00000443443 SEC11AP67812 179 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 ADIRFQ15847 76 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 TDRG1Q3Y452 100 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 SPTSSBQ8NFR3 76 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 OR10AG1Q8NH19 301 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 CMTM2Q8TAZ6 248 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 FAM213BQ8TBF2 198 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 LCTP09848 1927 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 SHANK3Q9BYB0 1731 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 SLX4Q8IY92 1834 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 PLIN4Q96Q06 1357 aa2.61□□□□□ -1.99
VPS50-206ENST00000443443 TRIOBPQ9H2D6 2365 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 ARAP2Q8WZ64 1704 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 MARF1Q9Y4F3 1742 aaKnown RBP2.6□□□□□ -1.99
VPS50-206ENST00000443443 THADAQ6YHU6 1953 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 IGLV4-60A0A075B6I1 120 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 TRAV13-2A0A0B4J235 113 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 DEFA5Q01523 94 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 ZNF833PQ6ZTB9 187 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 LYPD1Q8N2G4 141 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 C20orf78Q9BR46 151 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 SCN4AP35499 1836 aa2.6□□□□□ -1.99
VPS50-206ENST00000443443 TUBGCP6Q96RT7 1819 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 COL27A1Q8IZC6 1860 aaPredicted RBP2.59□□□□□ -1.99
VPS50-206ENST00000443443 CABIN1Q9Y6J0 2220 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 A0A1W2PNM2 257 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 CRYM-AS1A6NIL9 109 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 C2orf70A6NJV1 201 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 NDUFC1O43677 76 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 NUPR1O60356 82 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 RNASE2P10153 161 aaKnown RBP2.59□□□□□ -1.99
VPS50-206ENST00000443443 MPV17LQ2QL34 196 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 DEFB134Q4QY38 66 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 Q6ZTI0 123 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 CYP4F30PQ9H0H9 118 aa2.59□□□□□ -1.99
VPS50-206ENST00000443443 CHD1O14646 1710 aa2.59□□□□□ -2
VPS50-206ENST00000443443 DOCK9Q9BZ29 2069 aa2.59□□□□□ -2
VPS50-206ENST00000443443 KIDINS220Q9ULH0 1771 aa2.59□□□□□ -2
VPS50-206ENST00000443443 CCDC88BA6NC98 1476 aa2.58□□□□□ -2
VPS50-206ENST00000443443 GOLGA3Q08378 1498 aa2.58□□□□□ -2
VPS50-206ENST00000443443 MGAMO43451 1857 aa2.58□□□□□ -2
VPS50-206ENST00000443443 ARHGEF12Q9NZN5 1544 aa2.58□□□□□ -2
VPS50-206ENST00000443443 TMEM30CPA0ZSE6 113 aa2.58□□□□□ -2
VPS50-206ENST00000443443 PDCD5O14737 125 aa2.58□□□□□ -2
VPS50-206ENST00000443443 HRES1P13985 223 aa2.58□□□□□ -2
VPS50-206ENST00000443443 ELOBQ15370 118 aa2.58□□□□□ -2
VPS50-206ENST00000443443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.58□□□□□ -2
VPS50-206ENST00000443443 SERP2Q8N6R1 65 aa2.58□□□□□ -2
VPS50-206ENST00000443443 C9orf163Q8N9P6 203 aa2.58□□□□□ -2
VPS50-206ENST00000443443 C4orf3Q8WVX3 66 aa2.58□□□□□ -2
VPS50-206ENST00000443443 TRGV9Q99603 122 aa2.58□□□□□ -2
VPS50-206ENST00000443443 REG4Q9BYZ8 158 aa2.58□□□□□ -2
VPS50-206ENST00000443443 ST20Q9HBF5 79 aa2.58□□□□□ -2
VPS50-206ENST00000443443 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
VPS50-206ENST00000443443 ABCA3Q99758 1704 aa2.58□□□□□ -2
VPS50-206ENST00000443443 CLIP1P30622 1438 aa2.58□□□□□ -2
VPS50-206ENST00000443443 MCM3APO60318 1980 aa2.58□□□□□ -2
VPS50-206ENST00000443443 PRDM15P57071 1507 aaPredicted RBP2.58□□□□□ -2
VPS50-206ENST00000443443 LAMC3Q9Y6N6 1575 aa2.57□□□□□ -2
VPS50-206ENST00000443443 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
VPS50-206ENST00000443443 HCG22E2RYF7 251 aa2.57□□□□□ -2
VPS50-206ENST00000443443 H3BRM9 83 aa2.57□□□□□ -2
VPS50-206ENST00000443443 CTSGP08311 255 aa2.57□□□□□ -2
VPS50-206ENST00000443443 PDE6HQ13956 83 aa2.57□□□□□ -2
VPS50-206ENST00000443443 LINC00299Q6ZSB3 139 aa2.57□□□□□ -2
VPS50-206ENST00000443443 NDUFA11Q86Y39 141 aa2.57□□□□□ -2
VPS50-206ENST00000443443 LINC00474Q9P2X8 69 aa2.57□□□□□ -2
VPS50-206ENST00000443443 CACFD1Q9UGQ2 172 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms