RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LY96Q9Y6Y9 160 aa13.61□□□□□ -0.23
SHROOM1-204ENST00000440118 TRAV9-2A0A087WT02 112 aa13.6□□□□□ -0.23
SHROOM1-204ENST00000440118 S100A4P26447 101 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-204ENST00000440118 ARL2-SNX15V9GYD0 113 aa13.6□□□□□ -0.23
SHROOM1-204ENST00000440118 SH2D6Q7Z4S9 175 aa13.59□□□□□ -0.23
SHROOM1-204ENST00000440118 Q86TA4 180 aa13.59□□□□□ -0.23
SHROOM1-204ENST00000440118 LINC00479Q96M42 142 aa13.59□□□□□ -0.23
SHROOM1-204ENST00000440118 C11orf21Q9P2W6 132 aa13.59□□□□□ -0.23
SHROOM1-204ENST00000440118 FAM74A7A6NL05 159 aa13.58□□□□□ -0.24
SHROOM1-204ENST00000440118 UBE2G1P62253 170 aa13.58□□□□□ -0.24
SHROOM1-204ENST00000440118 HIST1H2BAQ96A08 127 aa13.58□□□□□ -0.24
SHROOM1-204ENST00000440118 PRADC1Q9BSG0 188 aa13.58□□□□□ -0.24
SHROOM1-204ENST00000440118 IGHV3-73A0A0B4J1V6 119 aa13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 LOC100131303A0A0U1RQF7 123 aa13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 GATA1P15976 413 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 EVI2AP22794 236 aa13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 CST9LP1Q5W188 147 aa13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 C9orf85Q96MD7 179 aa13.57□□□□□ -0.24
SHROOM1-204ENST00000440118 EREGO14944 169 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 ASIPP42127 132 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 RAB5CP51148 216 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 BLOC1S1P78537 153 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 RHOHQ15669 191 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 ZNF506Q5JVG8 444 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 CFAP126Q5VTH2 177 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 NFE4Q86UQ8 179 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 SLC7A5P1Q8MH63 180 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
SHROOM1-204ENST00000440118 FABP5P3A8MUU1 101 aa13.55□□□□□ -0.24
SHROOM1-204ENST00000440118 CIDEAO60543 219 aa13.55□□□□□ -0.24
SHROOM1-204ENST00000440118 ALKAL2Q6UX46 152 aa13.55□□□□□ -0.24
SHROOM1-204ENST00000440118 RS1O15537 224 aa13.54□□□□□ -0.24
SHROOM1-204ENST00000440118 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
SHROOM1-204ENST00000440118 FMC1Q96HJ9 113 aa13.54□□□□□ -0.24
SHROOM1-204ENST00000440118 A0A1B0GV50 99 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 PGPEP1LA6NFU8 196 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 B4DEV8 164 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 SEC11BP0C7V7 166 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 RNASE3P12724 160 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 AKR1C3P42330 323 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 SLC25A29Q8N8R3 303 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 FAM213BQ8TBF2 198 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
SHROOM1-204ENST00000440118 RYR1P21817 5038 aa13.52□□□□□ -0.24
SHROOM1-204ENST00000440118 IGKV3D-20A0A0C4DH25 116 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 TRBV6-4A0A1B0GX49 114 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 H3BVH4 76 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 K7EP13 123 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 M0R036 132 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 CRYGDP07320 174 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 MGST1P10620 155 aaKnown RBP13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 FHITP49789 147 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 DPPA3Q6W0C5 159 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 MSRB1Q9NZV6 116 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 ZFP30Q9Y2G7 519 aa13.52□□□□□ -0.25
SHROOM1-204ENST00000440118 TRAV8-6A0A0B4J262 113 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 A8MWV9 139 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 UMAD1C9J7I0 102 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 TEX46H3BTG2 121 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 OR10J3Q5JRS4 329 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 FAM162BQ5T6X4 162 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 COMMD7Q86VX2 200 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 SYT8Q8NBV8 401 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 PTH2Q96A98 100 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 ZC2HC1AQ96GY0 325 aa13.51□□□□□ -0.25
SHROOM1-204ENST00000440118 SH2D1AO60880 128 aa13.5□□□□□ -0.25
SHROOM1-204ENST00000440118 DNAH10OSP0CZ25 163 aa13.5□□□□□ -0.25
SHROOM1-204ENST00000440118 Q6ZRN7 208 aaPredicted RBP13.5□□□□□ -0.25
SHROOM1-204ENST00000440118 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
SHROOM1-204ENST00000440118 PAGE4O60829 102 aa13.49□□□□□ -0.25
SHROOM1-204ENST00000440118 TIRAPP58753 221 aa13.49□□□□□ -0.25
SHROOM1-204ENST00000440118 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
SHROOM1-204ENST00000440118 IL36BQ9NZH7 164 aa13.49□□□□□ -0.25
SHROOM1-204ENST00000440118 IGHV3-38A0A0C4DH36 116 aa13.48□□□□□ -0.25
SHROOM1-204ENST00000440118 KRBOX1C9JBD0 128 aa13.48□□□□□ -0.25
SHROOM1-204ENST00000440118 CDK2AP2O75956 126 aa13.48□□□□□ -0.25
SHROOM1-204ENST00000440118 KRTAP10-2P60368 255 aa13.48□□□□□ -0.25
SHROOM1-204ENST00000440118 PARLQ9H300 379 aa13.48□□□□□ -0.25
SHROOM1-204ENST00000440118 TMSB15BA0A087X1C1 80 aa13.47□□□□□ -0.25
SHROOM1-204ENST00000440118 RAB19A4D1S5 217 aa13.47□□□□□ -0.25
SHROOM1-204ENST00000440118 GRIFINA4D1Z8 144 aa13.47□□□□□ -0.25
SHROOM1-204ENST00000440118 SULT1A2P50226 295 aa13.47□□□□□ -0.25
SHROOM1-204ENST00000440118 ATP6V0E2Q8NHE4 81 aa13.47□□□□□ -0.25
SHROOM1-204ENST00000440118 PHLDA3Q9Y5J5 127 aa13.47□□□□□ -0.25
SHROOM1-204ENST00000440118 PSCAO43653 123 aa13.46□□□□□ -0.25
SHROOM1-204ENST00000440118 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
SHROOM1-204ENST00000440118 FAM74A4Q5TZK3 123 aa13.46□□□□□ -0.25
SHROOM1-204ENST00000440118 ZFP2Q6ZN57 461 aa13.46□□□□□ -0.25
SHROOM1-204ENST00000440118 TRBV6-1A0A0K0K1D8 114 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 RHODO00212 210 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 LTAP01374 205 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 H2AFB1P0C5Y9 115 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 ARMS2P0C7Q2 107 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 MAPKAPK5-AS1Q8N8E1 139 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 GTSF1LQ9H1H1 148 aa13.45□□□□□ -0.26
SHROOM1-204ENST00000440118 GAGE12JA6NER3 117 aa13.44□□□□□ -0.26
SHROOM1-204ENST00000440118 M0R381 172 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms