RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CR1P17927 2039 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 TMEM189A5PLL7 270 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 IGHG4P01861 327 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 CKS2P33552 79 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 SIGMAR1Q99720 223 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 VPREB3Q9UKI3 123 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 NDUFA4O00483 81 aa10.79□□□□□ -0.68
LIMD1-202ENST00000440097 HOXA3O43365 443 aaPredicted RBP10.79□□□□□ -0.68
LIMD1-202ENST00000440097 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
LIMD1-202ENST00000440097 TSSC4Q9Y5U2 329 aaPredicted RBP10.79□□□□□ -0.68
LIMD1-202ENST00000440097 SH2D1AO60880 128 aa10.79□□□□□ -0.68
LIMD1-202ENST00000440097 IGLV1-40P01703 118 aa10.79□□□□□ -0.68
LIMD1-202ENST00000440097 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
LIMD1-202ENST00000440097 K7EMI3 77 aa10.78□□□□□ -0.68
LIMD1-202ENST00000440097 IL17RELQ6ZVW7 336 aa10.78□□□□□ -0.68
LIMD1-202ENST00000440097 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
LIMD1-202ENST00000440097 NHP2Q9NX24 153 aaKnown RBP10.78□□□□□ -0.68
LIMD1-202ENST00000440097 SCGB1A1P11684 91 aa10.77□□□□□ -0.68
LIMD1-202ENST00000440097 WFDC11Q8NEX6 87 aa10.77□□□□□ -0.68
LIMD1-202ENST00000440097 HIGD1BQ9P298 99 aa10.77□□□□□ -0.68
LIMD1-202ENST00000440097 PDZD2O15018 2839 aa10.77□□□□□ -0.68
LIMD1-202ENST00000440097 WFDC2Q14508 124 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 AKAP9Q99996 3911 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 GAGE12HA6NDE8 117 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 ORM1P02763 201 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 TWIST1Q15672 202 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 TMEM78Q5T7P6 136 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 Q6YL49 198 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 HHLA3Q9XRX5 114 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 U3KQE9 123 aa10.77□□□□□ -0.69
LIMD1-202ENST00000440097 BMI1P35226 326 aa10.76□□□□□ -0.69
LIMD1-202ENST00000440097 ODF1Q14990 250 aa10.76□□□□□ -0.69
LIMD1-202ENST00000440097 CD300EQ496F6 205 aaPredicted RBP10.76□□□□□ -0.69
LIMD1-202ENST00000440097 ZNF80P51504 273 aaPredicted RBP10.76□□□□□ -0.69
LIMD1-202ENST00000440097 CFHR3Q02985 330 aa10.76□□□□□ -0.69
LIMD1-202ENST00000440097 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
LIMD1-202ENST00000440097 SPANXB1Q9NS25 103 aaPredicted RBP10.76□□□□□ -0.69
LIMD1-202ENST00000440097 TRBV25-1A0A075B6N4 114 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 TRAV8-2A0A0B4J237 113 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 BRI3O95415 125 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 PSMB8P28062 276 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 LEPP41159 167 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 RHPN1-AS1Q9BWJ2 59 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
LIMD1-202ENST00000440097 OTOGQ6ZRI0 2925 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 SRD5A1P18405 259 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 ZMAT4Q9H898 229 aa10.75□□□□□ -0.69
LIMD1-202ENST00000440097 GAS8-AS1O95177 125 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 PRSS1P07477 247 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 CEND1Q8N111 149 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 SMPXQ9UHP9 88 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 J3KRW8 73 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 IGKCP01834 107 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 CLUHP3Q96NS8 147 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 MAP1LC3AQ9H492 121 aa10.74□□□□□ -0.69
LIMD1-202ENST00000440097 FABP5P3A8MUU1 101 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 E9PLD3 99 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 FSHBP01225 129 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 C9orf139Q6ZV77 190 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 SH2D6Q7Z4S9 175 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 KRTAP1-3Q8IUG1 177 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 TM2D2Q9BX73 214 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 MSRB1Q9NZV6 116 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 IGLL5B9A064 214 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 F8W1H4 67 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 FOXC2Q99958 501 aa10.73□□□□□ -0.69
LIMD1-202ENST00000440097 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
LIMD1-202ENST00000440097 A0A1B0GV72 72 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 RBAKDNA6NC62 111 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 H3BMG7 143 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
LIMD1-202ENST00000440097 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 EDN2P20800 178 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 EVI2AP22794 236 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 FCER1GP30273 86 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 ETDBQ3ZM63 59 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 ZC2HC1BQ5TFG8 222 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
LIMD1-202ENST00000440097 SPAG8Q99932 426 aaPredicted RBP10.72□□□□□ -0.69
LIMD1-202ENST00000440097 J3QR89 54 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 DEFB1P60022 68 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 ZNF479Q96JC4 524 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 PSMG4Q5JS54 123 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
LIMD1-202ENST00000440097 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.7
LIMD1-202ENST00000440097 DPM2O94777 84 aa10.71□□□□□ -0.7
LIMD1-202ENST00000440097 AMTNQ6UX39 209 aa10.71□□□□□ -0.7
LIMD1-202ENST00000440097 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.7
LIMD1-202ENST00000440097 ZNF702PQ9H963 129 aa10.71□□□□□ -0.7
LIMD1-202ENST00000440097 IGLC6P0CF74 106 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
LIMD1-202ENST00000440097 TMEM160Q9NX00 188 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms