RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CDKN1BP46527 198 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 ANXA2RQ3ZCQ2 193 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 FAM159AQ6UWV7 190 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 GTSCR1Q86UQ5 136 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 LINC00518Q8N0U6 118 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 DEFB125Q8N687 156 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 KCNS1Q96KK3 526 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SAMD10Q9BYL1 202 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TIMM8BQ9Y5J9 83 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TRAV12-3A0A0B4J271 114 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SNAI2O43623 268 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 IGHV4-30-4P0DP06 118 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 ESDP10768 282 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 NTF3P20783 257 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 IQCJQ1A5X6 159 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SPINK13Q1W4C9 94 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 Q6ZQT7 251 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 C12orf57Q99622 126 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 C19orf73Q9NVV2 129 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TP53TG3Q9ULZ0 132 aa10.71□□□□□ -0.69
TNFRSF1A-204ENST00000440083 M0R2Z0 102 aa10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 HUWE1Q7Z6Z7 4374 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-204ENST00000440083 COL7A1Q02388 2944 aa10.69□□□□□ -0.7
TNFRSF1A-204ENST00000440083 OR11H12B2RN74 326 aa10.69□□□□□ -0.7
TNFRSF1A-204ENST00000440083 KIR3DS1Q14943 382 aa10.69□□□□□ -0.7
TNFRSF1A-204ENST00000440083 ODF3L2Q3SX64 289 aa10.69□□□□□ -0.7
TNFRSF1A-204ENST00000440083 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
TNFRSF1A-204ENST00000440083 OR10AG1Q8NH19 301 aa10.69□□□□□ -0.7
TNFRSF1A-204ENST00000440083 TRAV12-2A0A075B6T6 113 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 H3BMM0 161 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 HSBP1O75506 76 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 PMCHP20382 165 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 AMTP48728 403 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 LINC00310P59036 64 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 DNLZQ5SXM8 178 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 ORMDL3Q8N138 153 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 RCHY1Q96PM5 261 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 B9D2Q9BPU9 175 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 PHLDA3Q9Y5J5 127 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
TNFRSF1A-204ENST00000440083 A8MTW9 85 aa10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 NUPR1O60356 82 aa10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 ZNF124Q15973 351 aa10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 AGRNO00468 2067 aa10.67□□□□□ -0.7
TNFRSF1A-204ENST00000440083 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 TRGV11A0A075B6L2 103 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 IGHV4-4A0A075B6R2 117 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 D6R8Y8 96 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 M0R381 172 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 ZNF324O75467 553 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 CKS2P33552 79 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 FXYD7P58549 80 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 SBSPONQ8IVN8 264 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 STHQ8IWL8 128 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
TNFRSF1A-204ENST00000440083 GNRH2O43555 120 aa10.65□□□□□ -0.7
TNFRSF1A-204ENST00000440083 PPBPP02775 128 aa10.65□□□□□ -0.7
TNFRSF1A-204ENST00000440083 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
TNFRSF1A-204ENST00000440083 U3KQK5 164 aa10.65□□□□□ -0.7
TNFRSF1A-204ENST00000440083 INSP01308 110 aa10.64□□□□□ -0.71
TNFRSF1A-204ENST00000440083 TDRG1Q3Y452 100 aa10.64□□□□□ -0.71
TNFRSF1A-204ENST00000440083 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
TNFRSF1A-204ENST00000440083 NIT1Q86X76 327 aa10.64□□□□□ -0.71
TNFRSF1A-204ENST00000440083 SYT8Q8NBV8 401 aa10.64□□□□□ -0.71
TNFRSF1A-204ENST00000440083 A8MZ25 164 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 NCR2O95944 276 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 RNASE3P12724 160 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 RAB4AP20338 218 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 SCRT2Q9NQ03 307 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
TNFRSF1A-204ENST00000440083 CBY3A6NI87 242 aa10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 EVI2AP22794 236 aa10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 C20orf144Q9BQM9 153 aa10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 DPH3P1Q9H4G8 78 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms