RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 DNAJC30Q96LL9 226 aa12.27□□□□□ -0.45
DHFR-201ENST00000439211 RAI1Q7Z5J4 1906 aaPredicted RBP12.27□□□□□ -0.45
DHFR-201ENST00000439211 OOSP1A8MZH6 123 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 Q8N8P6 123 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 INS-IGF2F8WCM5 200 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
DHFR-201ENST00000439211 KLRB1Q12918 225 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 PVRIGQ6DKI7 326 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 NCOR2Q9Y618 2525 aa12.26□□□□□ -0.45
DHFR-201ENST00000439211 PTPN13Q12923 2485 aa12.25□□□□□ -0.45
DHFR-201ENST00000439211 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
DHFR-201ENST00000439211 KAAG1Q9UBP8 84 aa12.25□□□□□ -0.45
DHFR-201ENST00000439211 GRNP28799 593 aaKnown RBP12.25□□□□□ -0.45
DHFR-201ENST00000439211 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 TEX22C9J3V5 150 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 GAS8-AS1O95177 125 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 HERVK_113P63121 156 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 FAM19A5Q7Z5A7 132 aaPredicted RBP12.24□□□□□ -0.45
DHFR-201ENST00000439211 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 IGKV3-7A0A075B6H7 116 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 A4D1N5 150 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 ZNF491Q8N8L2 437 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 PLEKHB2Q96CS7 222 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 C2CD3Q4AC94 2353 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 DUX3Q96PT4 197 aa12.24□□□□□ -0.45
DHFR-201ENST00000439211 CSPG4Q6UVK1 2322 aa12.23□□□□□ -0.45
DHFR-201ENST00000439211 IGLV1-47P01700 117 aa12.23□□□□□ -0.45
DHFR-201ENST00000439211 MGPP08493 103 aa12.23□□□□□ -0.45
DHFR-201ENST00000439211 I3L2K1 104 aa12.23□□□□□ -0.45
DHFR-201ENST00000439211 DMXL1Q9Y485 3027 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 K7EIM0 57 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 EGR2P11161 476 aaPredicted RBP12.22□□□□□ -0.45
DHFR-201ENST00000439211 S100A4P26447 101 aaKnown RBP12.22□□□□□ -0.45
DHFR-201ENST00000439211 DTX2Q86UW9 622 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
DHFR-201ENST00000439211 CRIP1P50238 77 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 CRIP2P52943 208 aaPredicted RBP12.22□□□□□ -0.45
DHFR-201ENST00000439211 LAMA5O15230 3695 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 DLX6P56179 175 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 C8orf31Q8N9H6 132 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 ZMAT4Q9H898 229 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 TACC2O95359 2948 aa12.22□□□□□ -0.45
DHFR-201ENST00000439211 TRAV25A0A0B4J276 109 aa12.21□□□□□ -0.45
DHFR-201ENST00000439211 LINC01620Q4KN68 170 aa12.21□□□□□ -0.45
DHFR-201ENST00000439211 Q6Q795 121 aa12.21□□□□□ -0.45
DHFR-201ENST00000439211 DUSP14O95147 198 aaKnown RBP12.21□□□□□ -0.45
DHFR-201ENST00000439211 U3KQK5 164 aa12.21□□□□□ -0.45
DHFR-201ENST00000439211 SIGLEC15Q6ZMC9 328 aa12.21□□□□□ -0.46
DHFR-201ENST00000439211 TMEM14CQ9P0S9 112 aa12.21□□□□□ -0.46
DHFR-201ENST00000439211 ATMQ13315 3056 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 IL17RELQ6ZVW7 336 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 KALRNO60229 2985 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 H3BRN7 92 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 UBE2D3P61077 147 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 UBE2D2P62837 147 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 PIMREGQ9BSJ6 248 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 NDUFA7O95182 113 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 CFC1BP0CG36 223 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 CFC1P0CG37 223 aa12.2□□□□□ -0.46
DHFR-201ENST00000439211 IGHV3-64A0A075B6Q5 118 aa12.19□□□□□ -0.46
DHFR-201ENST00000439211 FSTL3O95633 263 aa12.19□□□□□ -0.46
DHFR-201ENST00000439211 RASL10AQ92737 203 aa12.19□□□□□ -0.46
DHFR-201ENST00000439211 ACACBO00763 2458 aa12.19□□□□□ -0.46
DHFR-201ENST00000439211 F5H768 121 aa12.19□□□□□ -0.46
DHFR-201ENST00000439211 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
DHFR-201ENST00000439211 IGHV3OR16-10A0A075B7F0 116 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 ERCC8Q13216 396 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 CLEC19AQ6UXS0 136 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
DHFR-201ENST00000439211 ORMDL2Q53FV1 153 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 LYPD1Q8N2G4 141 aa12.18□□□□□ -0.46
DHFR-201ENST00000439211 Q8NA96 180 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 PRR25Q96S07 402 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 RNF5Q99942 180 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 LINC00527Q9UJ94 153 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 CHD8Q9HCK8 2581 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 M0R381 172 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 TRAV8-3A0A0A6YYJ7 113 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 UBE2D1P51668 147 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 C15orf32Q32M92 178 aa12.17□□□□□ -0.46
DHFR-201ENST00000439211 VMO1Q7Z5L0 202 aa12.16□□□□□ -0.46
DHFR-201ENST00000439211 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
DHFR-201ENST00000439211 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
DHFR-201ENST00000439211 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
DHFR-201ENST00000439211 C2orf66Q6UXQ4 117 aa12.15□□□□□ -0.46
DHFR-201ENST00000439211 C3orf22Q8N5N4 141 aa12.15□□□□□ -0.46
DHFR-201ENST00000439211 COL27A1Q8IZC6 1860 aaPredicted RBP12.15□□□□□ -0.46
DHFR-201ENST00000439211 SPTBN4Q9H254 2564 aa12.15□□□□□ -0.46
DHFR-201ENST00000439211 CRYGBP07316 175 aa12.15□□□□□ -0.47
DHFR-201ENST00000439211 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.47
DHFR-201ENST00000439211 TRAV41A0A0B4J266 112 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms