RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FAM208BQ5VWN6 2430 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 SPRY2O43597 315 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 UBE2D1P51668 147 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 FAM231DQ6ZW35 169 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 TNRC6AQ8NDV7 1962 aaKnown RBP8.8□□□□□ -1
SCN4A-201ENST00000435607 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 DEFB135Q30KP9 77 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 TRBV7-3A0A075B6L6 115 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 BTCP35070 178 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 WDR81Q562E7 1941 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 COL4A5P29400 1685 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 DLEU1O43261 78 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 IGLV1-44P01699 117 aa8.8□□□□□ -1
SCN4A-201ENST00000435607 PRR20EP86478 221 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 PRR20CP86479 221 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 PRR20DP86480 221 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 PRR20BP86481 221 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 PRR20AP86496 221 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 CENPVL3A0A0U1RRI6 287 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 ATRAIDQ6UW56 229 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 C4orf3Q8WVX3 66 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 IGHV4-30-2A0A087WSY4 118 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 SPAG11BQ08648 103 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 SPATA25Q9BR10 227 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 GAGE12HA6NDE8 117 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 GNRH2O43555 120 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 MED13LQ71F56 2210 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.79□□□□□ -1
SCN4A-201ENST00000435607 IGHV2-70P01814 119 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 C18orf32Q8TCD1 76 aa8.79□□□□□ -1
SCN4A-201ENST00000435607 IGLC1P0CG04 106 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 JMJD7-PLA2G4BH0Y9G9 81 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 NPBQ8NG41 125 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 HIVEP2P31629 2446 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 SRCAPQ6ZRS2 3230 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 PRB1P04280 392 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 PIP4P1Q86T03 277 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 DEFB125Q8N687 156 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 KLK12Q9UKR0 248 aa8.78□□□□□ -1
SCN4A-201ENST00000435607 IGHV4-61A0A0C4DH41 118 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 TMEM89A2RUT3 159 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 COX8AP10176 69 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 FGF23Q9GZV9 251 aaPredicted RBP8.77□□□□□ -1.01
SCN4A-201ENST00000435607 SMIM27A0A1W2PRY6 76 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 PDE6GP18545 87 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 PSMB8P28062 276 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 FHL1Q13642 323 aa8.77□□□□□ -1.01
SCN4A-201ENST00000435607 A0A087WV48 116 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 SIVA1O15304 175 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 CFC1BP0CG36 223 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 CFC1P0CG37 223 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 ESM1Q9NQ30 184 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 CYTL1Q9NRR1 136 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 UBE2D4Q9Y2X8 147 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 WT1-ASQ06250 92 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 TEX22C9J3V5 150 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 ZNF491Q8N8L2 437 aa8.76□□□□□ -1.01
SCN4A-201ENST00000435607 IGHV4-38-2P0DP08 117 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 NFE4Q86UQ8 179 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 NDUFA11Q86Y39 141 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 SLX1AQ9BQ83 275 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 FRMPD3Q5JV73 1810 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 A0A0G2JRQ6 117 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 C10orf105Q8TEF2 133 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 KIAA1671Q9BY89 1806 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 QRFPP83859 136 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 Q6ZR03 302 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 C11orf52Q96A22 123 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 PRO0255Q9UI72 69 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 FREM1Q5H8C1 2179 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 Q6ZRM9 215 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 C2orf70A6NJV1 201 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 TMEM256-PLSCR3K7ERE1 68 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 TRBV12-3P01733 135 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 NPYP01303 97 aa8.75□□□□□ -1.01
SCN4A-201ENST00000435607 COLCA2A8K830 154 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 NCR3O14931 201 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 IGLC2P0DOY2 106 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 ZFP36P26651 326 aaKnown RBP8.74□□□□□ -1.01
SCN4A-201ENST00000435607 TPSG1Q9NRR2 321 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 LYL1P12980 280 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 AJUBAQ96IF1 538 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 SVIPQ8NHG7 77 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 IGKV1-6A0A0C4DH72 117 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 WDR86Q86TI4 376 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 SHISA2Q6UWI4 295 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 FAM215AQ9Y5M1 114 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 ODF3L1Q8IXM7 274 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 FXYD5Q96DB9 178 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 A0A087WZ39 114 aa8.74□□□□□ -1.01
SCN4A-201ENST00000435607 DAZAP2Q15038 168 aaPredicted RBP8.74□□□□□ -1.01
SCN4A-201ENST00000435607 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
SCN4A-201ENST00000435607 IGHV4OR15-8A0A075B7B6 117 aa8.73□□□□□ -1.01
SCN4A-201ENST00000435607 A0A087WW49 117 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms