RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 LAGE3Q14657 143 aa9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 LYPD1Q8N2G4 141 aa9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 F8P00451 2351 aa9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 GP9P14770 177 aa9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 GATA1P15976 413 aaPredicted RBP9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 SRSF2Q01130 221 aaKnown RBP9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 C10orf99Q6UWK7 81 aa9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 NPBQ8NG41 125 aa9.7□□□□□ -0.86
LRRTM1-206ENST00000433224 SLURP1P55000 103 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 KRTAP10-9P60411 292 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 PDE6HQ13956 83 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 UNQ9165/PRO28630Q6UXU0 137 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 H3BRM9 83 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 CDKN1BP46527 198 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 C11orf71Q6IPW1 123 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 VPREB3Q9UKI3 123 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 TMEM262E9PQX1 116 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 MSRB1Q9NZV6 116 aa9.69□□□□□ -0.86
LRRTM1-206ENST00000433224 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
LRRTM1-206ENST00000433224 LY6G5BQ8NDX9 201 aa9.68□□□□□ -0.86
LRRTM1-206ENST00000433224 CFHR3Q02985 330 aa9.68□□□□□ -0.86
LRRTM1-206ENST00000433224 LINC00574Q9H8X3 128 aa9.68□□□□□ -0.86
LRRTM1-206ENST00000433224 IGHV3-16A0A0C4DH30 117 aa9.68□□□□□ -0.86
LRRTM1-206ENST00000433224 HELZ2Q9BYK8 2649 aaKnown RBP9.68□□□□□ -0.86
LRRTM1-206ENST00000433224 HOXD3P31249 432 aaPredicted RBP9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 CTRLP40313 264 aa9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 CFHR4Q92496 578 aa9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 TRGV1A0A0A0MS02 117 aa9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 LGALS9BQ3B8N2 356 aa9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 LGALS9CQ6DKI2 356 aa9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 MRPL35Q9NZE8 188 aaKnown RBP9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 ATRQ13535 2644 aa9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 BBC3Q96PG8 261 aaPredicted RBP9.67□□□□□ -0.86
LRRTM1-206ENST00000433224 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 LOXL1Q08397 574 aaPredicted RBP9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 ANXA2RQ3ZCQ2 193 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 K7EP34 96 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 NDUFA4O00483 81 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 PGPEP1Q9NXJ5 209 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 A0A0U1RRA0 63 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 UBE2L6O14933 153 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 PHLDA1Q8WV24 401 aaPredicted RBP9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 C1orf159Q96HA4 380 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 COL12A1Q99715 3063 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 A0A1W2PPM0 123 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 GNRH2O43555 120 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 LINC01545Q5VT33 79 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 Q6ZS46 218 aa9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
LRRTM1-206ENST00000433224 ORMDL2Q53FV1 153 aa9.65□□□□□ -0.86
LRRTM1-206ENST00000433224 TMEM14CQ9P0S9 112 aa9.65□□□□□ -0.86
LRRTM1-206ENST00000433224 H3BMG7 143 aa9.65□□□□□ -0.86
LRRTM1-206ENST00000433224 BUB3O43684 328 aa9.65□□□□□ -0.86
LRRTM1-206ENST00000433224 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
LRRTM1-206ENST00000433224 SMPXQ9UHP9 88 aa9.65□□□□□ -0.86
LRRTM1-206ENST00000433224 TEP1Q99973 2627 aaKnown RBP9.65□□□□□ -0.87
LRRTM1-206ENST00000433224 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.87
LRRTM1-206ENST00000433224 IGHV7-4-1A0A0J9YVY3 117 aa9.65□□□□□ -0.87
LRRTM1-206ENST00000433224 CRXO43186 299 aaPredicted RBP9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 DEFB130BP0DP73 79 aa9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 DEFB130AP0DP74 79 aa9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 SPOCK3Q9BQ16 436 aa9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 ODF3BA8MYP8 253 aa9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 GEMIN7Q9H840 131 aaKnown RBP9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 LINC01619G3V211 115 aa9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 MBD6Q96DN6 1003 aa9.64□□□□□ -0.87
LRRTM1-206ENST00000433224 MAST4O15021 2626 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 J3QLI3 93 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 AVPP01185 164 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 KLF12Q9Y4X4 402 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 FLNAP21333 2647 aaKnown RBP9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 COX6CP09669 75 aa9.63□□□□□ -0.87
LRRTM1-206ENST00000433224 H7C1H1 209 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 CRYGCP07315 174 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 IGHV4OR15-8A0A075B7B6 117 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 A0A087WW49 117 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 PLNP26678 52 aa9.62□□□□□ -0.87
LRRTM1-206ENST00000433224 C19orf71A6NCJ1 209 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 CCDC140Q96MF4 163 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 FXYD2P54710 66 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 SPATA12Q7Z6I5 190 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 SH2D6Q7Z4S9 175 aa9.61□□□□□ -0.87
LRRTM1-206ENST00000433224 LY6LH3BQJ8 138 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms