RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 FAM159AQ6UWV7 190 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 AJUBAQ96IF1 538 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 RNF185Q96GF1 192 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 BUB3O43684 328 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 C5orf56Q8N8D9 126 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 MOB4Q9Y3A3 225 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 TRBV7-1A0A0A6YYK4 115 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 DEFB1P60022 68 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 H3BMG7 143 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 K7ERJ3 54 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 TRGV3P03979 118 aa9.97□□□□□ -0.81
COL12A1-205ENST00000425443 IGLC6P0CF74 106 aa9.96□□□□□ -0.81
COL12A1-205ENST00000425443 AMTNQ6UX39 209 aa9.96□□□□□ -0.81
COL12A1-205ENST00000425443 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.81
COL12A1-205ENST00000425443 IGHV1-69DA0A0B4J2H0 117 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 IGHV4-61A0A0C4DH41 118 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 IGHV1-69P01742 117 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 A0A1B0GWB2 263 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 HBDP02042 147 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 RPL11P62913 178 aaKnown RBP9.96□□□□□ -0.82
COL12A1-205ENST00000425443 LGALS9BQ3B8N2 356 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 LGALS9CQ6DKI2 356 aa9.96□□□□□ -0.82
COL12A1-205ENST00000425443 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 LINC00694P0DN24 101 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 DEFB104AQ8WTQ1 72 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 IFI27L1Q96BM0 104 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 F8WDY8 70 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 APOMO95445 188 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 COX8CQ7Z4L0 72 aa9.95□□□□□ -0.82
COL12A1-205ENST00000425443 CFAP46Q8IYW2 2715 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 NOTCH3Q9UM47 2321 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 PRSS1P07477 247 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 GCSHP23434 173 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 FHL3Q13643 280 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 C16orf92Q96LL3 132 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 C11orf21Q9P2W6 132 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 LEPP41159 167 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 TLN2Q9Y4G6 2542 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
COL12A1-205ENST00000425443 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
COL12A1-205ENST00000425443 TTC32Q5I0X7 151 aa9.93□□□□□ -0.82
COL12A1-205ENST00000425443 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-205ENST00000425443 SMAD7O15105 426 aaKnown RBP9.93□□□□□ -0.82
COL12A1-205ENST00000425443 IGHV3-11P01762 117 aa9.93□□□□□ -0.82
COL12A1-205ENST00000425443 H3BUX3 64 aa9.93□□□□□ -0.82
COL12A1-205ENST00000425443 IGHV4-38-2P0DP08 117 aa9.93□□□□□ -0.82
COL12A1-205ENST00000425443 NDUFV3P56181 108 aaKnown RBP9.93□□□□□ -0.82
COL12A1-205ENST00000425443 AGPAT4-IT1Q9H0P7 198 aa9.93□□□□□ -0.82
COL12A1-205ENST00000425443 ABCA2Q9BZC7 2435 aa9.93□□□□□ -0.82
COL12A1-205ENST00000425443 CLPSL1A2RUU4 121 aa9.92□□□□□ -0.82
COL12A1-205ENST00000425443 IGF1P05019 195 aa9.92□□□□□ -0.82
COL12A1-205ENST00000425443 MAP1LC3AQ9H492 121 aa9.92□□□□□ -0.82
COL12A1-205ENST00000425443 IGKV3D-20A0A0C4DH25 116 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 FCER1GP30273 86 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 C10orf105Q8TEF2 133 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 FAM223BA6NKX1 122 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 EMP1P54849 157 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 FAM223AQ8IWN6 122 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 EDA2RQ9HAV5 297 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 HHLA3Q9XRX5 114 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 MYO9AB2RTY4 2548 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 IGHV4-30-2A0A087WSY4 118 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 A1L4Q6 167 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 F8W1H4 67 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 TRBV12-3P01733 135 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 SEC61GP60059 68 aa9.91□□□□□ -0.82
COL12A1-205ENST00000425443 H3BVH4 76 aa9.9□□□□□ -0.82
COL12A1-205ENST00000425443 SRD5A1P18405 259 aa9.9□□□□□ -0.82
COL12A1-205ENST00000425443 SPANXN1Q5VSR9 72 aa9.9□□□□□ -0.82
COL12A1-205ENST00000425443 RBAKDNA6NC62 111 aa9.9□□□□□ -0.82
COL12A1-205ENST00000425443 LRRK2Q5S007 2527 aa9.9□□□□□ -0.83
COL12A1-205ENST00000425443 SETD2Q9BYW2 2564 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-205ENST00000425443 PIFOQ8TCI5 191 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 TMEM158Q8WZ71 300 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 FOXC2Q99958 501 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 M0R381 172 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 TRAV8-2A0A0B4J237 113 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 MSMBP08118 114 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 FOXI1Q12951 378 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 AGRNO00468 2067 aa9.89□□□□□ -0.83
COL12A1-205ENST00000425443 F6UB75 175 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 GAGE2EQ4V326 116 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 GTSCR1Q86UQ5 136 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 TMEM160Q9NX00 188 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 GAGE2DQ9UEU5 116 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
COL12A1-205ENST00000425443 BLCAPP62952 87 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms